Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.04■■□□□ 1.92
RC3H1Q5TC82 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RC3H1Q5TC82 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RC3H1Q5TC82 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RC3H1Q5TC82 RPS2P4-201ENST00000476944 856 ntBASIC27.04■■□□□ 1.92
RC3H1Q5TC82 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC27.04■■□□□ 1.92
RC3H1Q5TC82 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.04■■□□□ 1.92
RC3H1Q5TC82 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC27.04■■□□□ 1.92
RC3H1Q5TC82 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC27.04■■□□□ 1.92
RC3H1Q5TC82 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC27.04■■□□□ 1.92
RC3H1Q5TC82 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RC3H1Q5TC82 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RC3H1Q5TC82 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC27.03■■□□□ 1.92
RC3H1Q5TC82 OR2A1-AS1-201ENST00000462305 773 ntBASIC27.03■■□□□ 1.92
RC3H1Q5TC82 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC27.03■■□□□ 1.92
RC3H1Q5TC82 CD44-222ENST00000526025 1052 ntTSL 2 BASIC27.03■■□□□ 1.92
RC3H1Q5TC82 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RC3H1Q5TC82 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC27.03■■□□□ 1.92
RC3H1Q5TC82 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC27.02■■□□□ 1.92
RC3H1Q5TC82 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RC3H1Q5TC82 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC27.02■■□□□ 1.92
RC3H1Q5TC82 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
RC3H1Q5TC82 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RC3H1Q5TC82 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RC3H1Q5TC82 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC27.02■■□□□ 1.92
RC3H1Q5TC82 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC27.02■■□□□ 1.92
RC3H1Q5TC82 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
RC3H1Q5TC82 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RC3H1Q5TC82 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC27.02■■□□□ 1.92
RC3H1Q5TC82 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
RC3H1Q5TC82 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RC3H1Q5TC82 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC27.01■■□□□ 1.92
RC3H1Q5TC82 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.92
RC3H1Q5TC82 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 CASP6-205ENST00000505486 538 ntTSL 4 BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
RC3H1Q5TC82 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RC3H1Q5TC82 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC27■■□□□ 1.91
RC3H1Q5TC82 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RC3H1Q5TC82 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC27■■□□□ 1.91
RC3H1Q5TC82 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC27■■□□□ 1.91
RC3H1Q5TC82 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC27■■□□□ 1.91
RC3H1Q5TC82 AC073648.6-201ENST00000641589 218 ntBASIC27■■□□□ 1.91
RC3H1Q5TC82 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RC3H1Q5TC82 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC27■■□□□ 1.91
RC3H1Q5TC82 AC137767.1-201ENST00000602918 1920 ntBASIC27■■□□□ 1.91
RC3H1Q5TC82 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.99■■□□□ 1.91
RC3H1Q5TC82 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RC3H1Q5TC82 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RC3H1Q5TC82 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RC3H1Q5TC82 AP003097.1-201ENST00000530657 1135 ntBASIC26.99■■□□□ 1.91
RC3H1Q5TC82 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.99■■□□□ 1.91
RC3H1Q5TC82 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RC3H1Q5TC82 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RC3H1Q5TC82 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RC3H1Q5TC82 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RC3H1Q5TC82 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RC3H1Q5TC82 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RC3H1Q5TC82 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.98■■□□□ 1.91
RC3H1Q5TC82 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.98■■□□□ 1.91
RC3H1Q5TC82 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.98■■□□□ 1.91
RC3H1Q5TC82 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.98■■□□□ 1.91
RC3H1Q5TC82 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RC3H1Q5TC82 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.98■■□□□ 1.91
RC3H1Q5TC82 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.98■■□□□ 1.91
RC3H1Q5TC82 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.98■■□□□ 1.91
RC3H1Q5TC82 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.98■■□□□ 1.91
RC3H1Q5TC82 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.98■■□□□ 1.91
RC3H1Q5TC82 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RC3H1Q5TC82 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
RC3H1Q5TC82 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.97■■□□□ 1.91
RC3H1Q5TC82 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
RC3H1Q5TC82 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.97■■□□□ 1.91
RC3H1Q5TC82 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.97■■□□□ 1.91
RC3H1Q5TC82 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
RC3H1Q5TC82 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RC3H1Q5TC82 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RC3H1Q5TC82 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RC3H1Q5TC82 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RC3H1Q5TC82 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RC3H1Q5TC82 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RC3H1Q5TC82 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RC3H1Q5TC82 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
RC3H1Q5TC82 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.96■■□□□ 1.91
RC3H1Q5TC82 UNC93B4-201ENST00000505679 747 ntBASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms