Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DEPDC1Q5TB30 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
DEPDC1Q5TB30 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.49■□□□□ 0.87
DEPDC1Q5TB30 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 MIR572-201ENST00000384983 95 ntBASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 MIR638-201ENST00000385237 100 ntBASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
DEPDC1Q5TB30 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 AC007375.3-201ENST00000600936 2314 ntBASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 AC105233.4-201ENST00000642045 216 ntBASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 AC026471.6-201ENST00000622954 1905 ntBASIC20.47■□□□□ 0.87
DEPDC1Q5TB30 AC092667.1-201ENST00000434301 2586 ntBASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DEPDC1Q5TB30 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DEPDC1Q5TB30 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.44■□□□□ 0.86
DEPDC1Q5TB30 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DEPDC1Q5TB30 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms