Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 pRNA.6-201ENST00000610482 90 ntBASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 pRNA.5-201ENST00000612139 90 ntBASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 pRNA.11-201ENST00000618423 90 ntBASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 pRNA.13-201ENST00000619112 90 ntBASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00242Q5T6M2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 AC087239.1-201ENST00000622671 572 ntBASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00242Q5T6M2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00242Q5T6M2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC00242Q5T6M2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 AC006455.2-201ENST00000429931 906 ntBASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 TSPY9P-201ENST00000440215 945 ntBASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 TSPY11P-201ENST00000442607 1045 ntBASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 AL034346.1-201ENST00000568244 1277 ntBASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC00242Q5T6M2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms