Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AL358852.1-201ENST00000623174 1268 ntBASIC21.42■■□□□ 1.02
KHDC1Q4VXA5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
KHDC1Q4VXA5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.41■■□□□ 1.02
KHDC1Q4VXA5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.41■■□□□ 1.02
KHDC1Q4VXA5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KHDC1Q4VXA5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.41■■□□□ 1.02
KHDC1Q4VXA5 AL354811.1-201ENST00000610286 706 ntBASIC21.41■■□□□ 1.02
KHDC1Q4VXA5 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.41■■□□□ 1.02
KHDC1Q4VXA5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KHDC1Q4VXA5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
KHDC1Q4VXA5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
KHDC1Q4VXA5 RNF165-205ENST00000588679 2904 ntBASIC21.41■■□□□ 1.02
KHDC1Q4VXA5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
KHDC1Q4VXA5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.41■■□□□ 1.02
KHDC1Q4VXA5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 FAM99A-202ENST00000538190 1989 ntBASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 AC026271.2-201ENST00000428091 497 ntBASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KHDC1Q4VXA5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.39■■□□□ 1.02
KHDC1Q4VXA5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KHDC1Q4VXA5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
KHDC1Q4VXA5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.39■■□□□ 1.01
KHDC1Q4VXA5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KHDC1Q4VXA5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.39■■□□□ 1.01
KHDC1Q4VXA5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.39■■□□□ 1.01
KHDC1Q4VXA5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.38■■□□□ 1.01
KHDC1Q4VXA5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 AC027612.3-201ENST00000413684 1047 ntBASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 RARRES2P6-201ENST00000567333 442 ntBASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
KHDC1Q4VXA5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 OR7E47P-201ENST00000546390 1422 ntBASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KHDC1Q4VXA5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KHDC1Q4VXA5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KHDC1Q4VXA5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.35■■□□□ 1.01
KHDC1Q4VXA5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KHDC1Q4VXA5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KHDC1Q4VXA5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
KHDC1Q4VXA5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.35■■□□□ 1.01
KHDC1Q4VXA5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms