Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.56■□□□□ 0.4
ANKRD55Q3KP44 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 AP005212.1-201ENST00000581547 1997 ntBASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 AL391422.3-201ENST00000603791 2761 ntBASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 OR7E47P-201ENST00000546390 1422 ntBASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ANKRD55Q3KP44 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ANKRD55Q3KP44 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 AC073314.1-201ENST00000568729 2216 ntBASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ANKRD55Q3KP44 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.52■□□□□ 0.4
ANKRD55Q3KP44 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ANKRD55Q3KP44 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ANKRD55Q3KP44 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
ANKRD55Q3KP44 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.52■□□□□ 0.4
ANKRD55Q3KP44 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ANKRD55Q3KP44 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ANKRD55Q3KP44 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.52■□□□□ 0.4
ANKRD55Q3KP44 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.52■□□□□ 0.4
ANKRD55Q3KP44 AC137630.3-201ENST00000607245 391 ntBASIC17.52■□□□□ 0.4
ANKRD55Q3KP44 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.52■□□□□ 0.4
ANKRD55Q3KP44 AL031602.1-201ENST00000633169 911 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms