Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 AC010525.1-201ENST00000585559 441 ntBASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 TSPY26P-201ENST00000476365 1326 ntBASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCGF3Q3KNV8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 AC087239.1-201ENST00000622671 572 ntBASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCGF3Q3KNV8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCGF3Q3KNV8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.66■□□□□ 0.58
PCGF3Q3KNV8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.66■□□□□ 0.58
PCGF3Q3KNV8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCGF3Q3KNV8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.66■□□□□ 0.58
PCGF3Q3KNV8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCGF3Q3KNV8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCGF3Q3KNV8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCGF3Q3KNV8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.66■□□□□ 0.58
PCGF3Q3KNV8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCGF3Q3KNV8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCGF3Q3KNV8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
PCGF3Q3KNV8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCGF3Q3KNV8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCGF3Q3KNV8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PCGF3Q3KNV8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCGF3Q3KNV8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.65■□□□□ 0.58
PCGF3Q3KNV8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCGF3Q3KNV8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.65■□□□□ 0.58
PCGF3Q3KNV8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCGF3Q3KNV8 AC244015.2-201ENST00000616358 1861 ntBASIC18.65■□□□□ 0.58
PCGF3Q3KNV8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
PCGF3Q3KNV8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCGF3Q3KNV8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCGF3Q3KNV8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCGF3Q3KNV8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCGF3Q3KNV8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.64■□□□□ 0.57
PCGF3Q3KNV8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms