Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PDS5AQ29RF7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDS5AQ29RF7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PDS5AQ29RF7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.62■■□□□ 1.69
PDS5AQ29RF7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PDS5AQ29RF7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDS5AQ29RF7 AC133552.2-202ENST00000575694 574 ntBASIC25.62■■□□□ 1.69
PDS5AQ29RF7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.61■■□□□ 1.69
PDS5AQ29RF7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
PDS5AQ29RF7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
PDS5AQ29RF7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
PDS5AQ29RF7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDS5AQ29RF7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.6■■□□□ 1.69
PDS5AQ29RF7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDS5AQ29RF7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PDS5AQ29RF7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
PDS5AQ29RF7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDS5AQ29RF7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.6■■□□□ 1.69
PDS5AQ29RF7 AC142086.2-201ENST00000569753 217 ntBASIC25.6■■□□□ 1.69
PDS5AQ29RF7 AC243732.1-201ENST00000612648 864 ntBASIC25.6■■□□□ 1.69
PDS5AQ29RF7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDS5AQ29RF7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDS5AQ29RF7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDS5AQ29RF7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.59■■□□□ 1.69
PDS5AQ29RF7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC25.59■■□□□ 1.69
PDS5AQ29RF7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDS5AQ29RF7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDS5AQ29RF7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
PDS5AQ29RF7 TSPY6P-201ENST00000448518 926 ntBASIC25.59■■□□□ 1.69
PDS5AQ29RF7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.59■■□□□ 1.69
PDS5AQ29RF7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
PDS5AQ29RF7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDS5AQ29RF7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDS5AQ29RF7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDS5AQ29RF7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDS5AQ29RF7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PDS5AQ29RF7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.58■■□□□ 1.69
PDS5AQ29RF7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.58■■□□□ 1.69
PDS5AQ29RF7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDS5AQ29RF7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDS5AQ29RF7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDS5AQ29RF7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PDS5AQ29RF7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDS5AQ29RF7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC25.58■■□□□ 1.69
PDS5AQ29RF7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC25.58■■□□□ 1.69
PDS5AQ29RF7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.58■■□□□ 1.68
PDS5AQ29RF7 FAM99A-202ENST00000538190 1989 ntBASIC25.58■■□□□ 1.68
PDS5AQ29RF7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
PDS5AQ29RF7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDS5AQ29RF7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDS5AQ29RF7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDS5AQ29RF7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDS5AQ29RF7 AC068338.2-201ENST00000563278 1430 ntBASIC25.57■■□□□ 1.68
PDS5AQ29RF7 RBM17P2-201ENST00000616397 1405 ntBASIC25.57■■□□□ 1.68
PDS5AQ29RF7 AC026471.6-201ENST00000622954 1905 ntBASIC25.57■■□□□ 1.68
PDS5AQ29RF7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDS5AQ29RF7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDS5AQ29RF7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.57■■□□□ 1.68
PDS5AQ29RF7 AC083906.2-201ENST00000511578 360 ntBASIC25.57■■□□□ 1.68
PDS5AQ29RF7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.57■■□□□ 1.68
PDS5AQ29RF7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC25.57■■□□□ 1.68
PDS5AQ29RF7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC25.57■■□□□ 1.68
PDS5AQ29RF7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
PDS5AQ29RF7 AC061975.6-201ENST00000579045 1553 ntBASIC25.57■■□□□ 1.68
PDS5AQ29RF7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
PDS5AQ29RF7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PDS5AQ29RF7 CYP2T1P-201ENST00000432607 1285 ntBASIC25.56■■□□□ 1.68
PDS5AQ29RF7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.56■■□□□ 1.68
PDS5AQ29RF7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PDS5AQ29RF7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC25.56■■□□□ 1.68
PDS5AQ29RF7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.56■■□□□ 1.68
PDS5AQ29RF7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
PDS5AQ29RF7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDS5AQ29RF7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.55■■□□□ 1.68
PDS5AQ29RF7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.55■■□□□ 1.68
PDS5AQ29RF7 AC242852.2-201ENST00000615738 1807 ntBASIC25.55■■□□□ 1.68
PDS5AQ29RF7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PDS5AQ29RF7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PDS5AQ29RF7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PDS5AQ29RF7 AL162412.1-201ENST00000567129 965 ntBASIC25.55■■□□□ 1.68
PDS5AQ29RF7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.55■■□□□ 1.68
PDS5AQ29RF7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms