Protein–RNA interactions for Protein: P89113

DDR2, Protein DDR2, yeast

Predictions only

Length 61 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
DDR2	P89113	ECM2	YBR065C	1095 nt		1.31	□□□□□ -2.2
DDR2	P89113	MUD1	YBR119W	897 nt		1.31	□□□□□ -2.2
DDR2	P89113	KAP123	YER110C	3342 nt		1.31	□□□□□ -2.2
DDR2	P89113	CLN2	YPL256C	1638 nt		1.3	□□□□□ -2.2
DDR2	P89113	RTN1	YDR233C	888 nt		1.3	□□□□□ -2.2
DDR2	P89113	YER172C-A	YER172C-A	381 nt		1.3	□□□□□ -2.2
DDR2	P89113	KXD1	YGL079W	657 nt		1.3	□□□□□ -2.2
DDR2	P89113	RPS22B	YLR367W	393 nt		1.3	□□□□□ -2.2
DDR2	P89113	OCA2	YNL056W	594 nt		1.3	□□□□□ -2.2
DDR2	P89113	IBD2	YNL164C	1056 nt		1.3	□□□□□ -2.2
DDR2	P89113	HST2	YPL015C	1074 nt		1.3	□□□□□ -2.2
DDR2	P89113	CBP6	YBR120C	489 nt		1.3	□□□□□ -2.2
DDR2	P89113	RAV1	YJR033C	4074 nt		1.3	□□□□□ -2.2
DDR2	P89113	ART10	YLR392C	1557 nt		1.3	□□□□□ -2.2
DDR2	P89113	CIN1	YOR349W	3045 nt		1.29	□□□□□ -2.2
DDR2	P89113	NEO1	YIL048W	3456 nt		1.29	□□□□□ -2.2
DDR2	P89113	ASP1	YDR321W	1146 nt		1.29	□□□□□ -2.2
DDR2	P89113	VEL1	YGL258W	621 nt		1.29	□□□□□ -2.2
DDR2	P89113	ATP7	YKL016C	525 nt		1.29	□□□□□ -2.2
DDR2	P89113	YPR027C	YPR027C	834 nt		1.29	□□□□□ -2.2
DDR2	P89113	DIS3	YOL021C	3006 nt		1.29	□□□□□ -2.2
DDR2	P89113	INP53	YOR109W	3324 nt		1.29	□□□□□ -2.2
DDR2	P89113	SMI1	YGR229C	1518 nt		1.29	□□□□□ -2.2
DDR2	P89113	DUG2	YBR281C	2637 nt		1.28	□□□□□ -2.2
DDR2	P89113	HPA3	YEL066W	540 nt		1.28	□□□□□ -2.2
DDR2	P89113	CDC73	YLR418C	1182 nt		1.28	□□□□□ -2.2
DDR2	P89113	YIG1	YPL201C	1386 nt		1.28	□□□□□ -2.2
DDR2	P89113	RPN3	YER021W	1572 nt		1.28	□□□□□ -2.2
DDR2	P89113	HDA2	YDR295C	2025 nt		1.28	□□□□□ -2.2
DDR2	P89113	NAB6	YML117W	3405 nt		1.28	□□□□□ -2.21
DDR2	P89113	TOP2	YNL088W	4287 nt		1.28	□□□□□ -2.21
DDR2	P89113	YCR013C	YCR013C	648 nt		1.27	□□□□□ -2.21
DDR2	P89113	BRR6	YGL247W	594 nt		1.27	□□□□□ -2.21
DDR2	P89113	AIM25	YJR100C	984 nt		1.27	□□□□□ -2.21
DDR2	P89113	PSY3	YLR376C	729 nt		1.27	□□□□□ -2.21
DDR2	P89113	RPL20A	YMR242C	519 nt		1.27	□□□□□ -2.21
DDR2	P89113	SPS18	YNL204C	903 nt		1.27	□□□□□ -2.21
DDR2	P89113	YOL166C	YOL166C	339 nt		1.27	□□□□□ -2.21
DDR2	P89113	RGA1	YOR127W	3024 nt		1.26	□□□□□ -2.21
DDR2	P89113	CHC1	YGL206C	4962 nt		1.26	□□□□□ -2.21
DDR2	P89113	RPB9	YGL070C	369 nt		1.26	□□□□□ -2.21
DDR2	P89113	GLG2	YJL137C	1143 nt		1.26	□□□□□ -2.21
DDR2	P89113	NET1	YJL076W	3570 nt		1.26	□□□□□ -2.21
DDR2	P89113	CWC22	YGR278W	1734 nt		1.26	□□□□□ -2.21
DDR2	P89113	DIT1	YDR403W	1611 nt		1.26	□□□□□ -2.21
DDR2	P89113	GYP5	YPL249C	2685 nt		1.25	□□□□□ -2.21
DDR2	P89113	SSY1	YDR160W	2559 nt		1.25	□□□□□ -2.21
DDR2	P89113	RRP42	YDL111C	798 nt		1.25	□□□□□ -2.21
DDR2	P89113	INO2	YDR123C	915 nt		1.25	□□□□□ -2.21
DDR2	P89113	SPT15	YER148W	723 nt		1.25	□□□□□ -2.21
DDR2	P89113	PEA2	YER149C	1263 nt		1.25	□□□□□ -2.21
DDR2	P89113	SPT2	YER161C	1002 nt		1.25	□□□□□ -2.21
DDR2	P89113	BRP1	YGL007W	378 nt		1.25	□□□□□ -2.21
DDR2	P89113	RSM25	YIL093C	795 nt		1.25	□□□□□ -2.21
DDR2	P89113	YIL163C	YIL163C	354 nt		1.25	□□□□□ -2.21
DDR2	P89113	TAF4	YMR005W	1167 nt		1.25	□□□□□ -2.21
DDR2	P89113	SIP18	YMR175W	240 nt		1.25	□□□□□ -2.21
DDR2	P89113	YNL035C	YNL035C	1170 nt		1.25	□□□□□ -2.21
DDR2	P89113	YNL165W	YNL165W	1221 nt		1.25	□□□□□ -2.21
DDR2	P89113	RPL25	YOL127W	429 nt		1.25	□□□□□ -2.21
DDR2	P89113	PNO1	YOR145C	825 nt		1.25	□□□□□ -2.21
DDR2	P89113	TMA16	YOR252W	537 nt		1.25	□□□□□ -2.21
DDR2	P89113	HMT1	YBR034C	1047 nt		1.25	□□□□□ -2.21
DDR2	P89113	NRP1	YDL167C	2160 nt		1.25	□□□□□ -2.21
DDR2	P89113	UTP21	YLR409C	2820 nt		1.25	□□□□□ -2.21
DDR2	P89113	LAP2	YNL045W	2016 nt		1.24	□□□□□ -2.21
DDR2	P89113	ADH4	YGL256W	1149 nt		1.24	□□□□□ -2.21
DDR2	P89113	COS3	YML132W	1140 nt		1.24	□□□□□ -2.21
DDR2	P89113	ADI1	YMR009W	540 nt		1.24	□□□□□ -2.21
DDR2	P89113	MAC1	YMR021C	1254 nt		1.24	□□□□□ -2.21
DDR2	P89113	ARA1	YBR149W	1035 nt		1.24	□□□□□ -2.21
DDR2	P89113	COS2	YBR302C	1140 nt		1.24	□□□□□ -2.21
DDR2	P89113	VPS15	YBR097W	4365 nt		1.24	□□□□□ -2.21
DDR2	P89113	VPS34	YLR240W	2628 nt		1.23	□□□□□ -2.21
DDR2	P89113	FAB1	YFR019W	6837 nt		1.23	□□□□□ -2.21
DDR2	P89113	STD1	YOR047C	1335 nt		1.23	□□□□□ -2.21
DDR2	P89113	MRP10	YDL045W-A	288 nt		1.23	□□□□□ -2.21
DDR2	P89113	YER068C-A	YER068C-A	432 nt		1.23	□□□□□ -2.21
DDR2	P89113	EMP24	YGL200C	612 nt		1.23	□□□□□ -2.21
DDR2	P89113	YKR047W	YKR047W	306 nt		1.23	□□□□□ -2.21
DDR2	P89113	NDL1	YLR254C	570 nt		1.23	□□□□□ -2.21
DDR2	P89113	RPL36A	YMR194W	303 nt		1.23	□□□□□ -2.21
DDR2	P89113	REG2	YBR050C	1017 nt		1.23	□□□□□ -2.21
DDR2	P89113	RTP1	YMR185W	2946 nt		1.23	□□□□□ -2.21
DDR2	P89113	CDC60	YPL160W	3273 nt		1.23	□□□□□ -2.21
DDR2	P89113	HRD1	YOL013C	1656 nt		1.23	□□□□□ -2.21
DDR2	P89113	TOP1	YOL006C	2310 nt		1.22	□□□□□ -2.21
DDR2	P89113	PET191	YJR034W	327 nt		1.22	□□□□□ -2.21
DDR2	P89113	YOR392W	YOR392W	444 nt		1.22	□□□□□ -2.21
DDR2	P89113	TAF14	YPL129W	735 nt		1.22	□□□□□ -2.21
DDR2	P89113	NRG2	YBR066C	663 nt		1.22	□□□□□ -2.21
DDR2	P89113	MBA1	YBR185C	837 nt		1.22	□□□□□ -2.21
DDR2	P89113	SLN1	YIL147C	3663 nt		1.22	□□□□□ -2.21
DDR2	P89113	MAK11	YKL021C	1407 nt		1.22	□□□□□ -2.21
DDR2	P89113	SEC31	YDL195W	3822 nt		1.22	□□□□□ -2.21
DDR2	P89113	INO80	YGL150C	4470 nt		1.22	□□□□□ -2.21
DDR2	P89113	YLR446W	YLR446W	1302 nt		1.21	□□□□□ -2.22
DDR2	P89113	NPL4	YBR170C	1743 nt		1.21	□□□□□ -2.22
DDR2	P89113	YIL092W	YIL092W	1902 nt		1.21	□□□□□ -2.22
DDR2	P89113	CUE3	YGL110C	1875 nt		1.21	□□□□□ -2.22

Retrieved 100 of 7,029 protein–RNA pairs in 21.6 ms