Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YBX1P67809 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.71■□□□□ 0.91
YBX1P67809 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
YBX1P67809 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
YBX1P67809 TPRG1LP1-201ENST00000598702 760 ntBASIC20.71■□□□□ 0.91
YBX1P67809 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
YBX1P67809 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
YBX1P67809 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YBX1P67809 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YBX1P67809 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YBX1P67809 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YBX1P67809 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YBX1P67809 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YBX1P67809 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
YBX1P67809 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YBX1P67809 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
YBX1P67809 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.7■□□□□ 0.9
YBX1P67809 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
YBX1P67809 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.7■□□□□ 0.9
YBX1P67809 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
YBX1P67809 AC087623.3-201ENST00000607047 1098 ntBASIC20.7■□□□□ 0.9
YBX1P67809 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YBX1P67809 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YBX1P67809 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
YBX1P67809 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
YBX1P67809 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.69■□□□□ 0.9
YBX1P67809 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YBX1P67809 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
YBX1P67809 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YBX1P67809 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YBX1P67809 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YBX1P67809 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YBX1P67809 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YBX1P67809 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YBX1P67809 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YBX1P67809 RARRES2P6-201ENST00000567333 442 ntBASIC20.69■□□□□ 0.9
YBX1P67809 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YBX1P67809 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.69■□□□□ 0.9
YBX1P67809 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.69■□□□□ 0.9
YBX1P67809 AF106564.1-201ENST00000607058 2553 ntBASIC20.69■□□□□ 0.9
YBX1P67809 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
YBX1P67809 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YBX1P67809 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.69■□□□□ 0.9
YBX1P67809 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
YBX1P67809 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YBX1P67809 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YBX1P67809 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.68■□□□□ 0.9
YBX1P67809 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YBX1P67809 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YBX1P67809 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.68■□□□□ 0.9
YBX1P67809 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
YBX1P67809 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YBX1P67809 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.67■□□□□ 0.9
YBX1P67809 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YBX1P67809 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
YBX1P67809 YBX1P1-201ENST00000445822 960 ntBASIC20.67■□□□□ 0.9
YBX1P67809 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
YBX1P67809 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.67■□□□□ 0.9
YBX1P67809 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.67■□□□□ 0.9
YBX1P67809 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
YBX1P67809 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
YBX1P67809 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YBX1P67809 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.67■□□□□ 0.9
YBX1P67809 AC073130.3-201ENST00000624389 2278 ntBASIC20.66■□□□□ 0.9
YBX1P67809 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
YBX1P67809 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
YBX1P67809 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.66■□□□□ 0.9
YBX1P67809 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
YBX1P67809 AC097381.1-201ENST00000429019 1296 ntBASIC20.66■□□□□ 0.9
YBX1P67809 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.66■□□□□ 0.9
YBX1P67809 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.66■□□□□ 0.9
YBX1P67809 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.66■□□□□ 0.9
YBX1P67809 AC005224.4-201ENST00000583262 1652 ntBASIC20.66■□□□□ 0.9
YBX1P67809 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.66■□□□□ 0.9
YBX1P67809 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
YBX1P67809 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
YBX1P67809 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
YBX1P67809 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
YBX1P67809 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.65■□□□□ 0.9
YBX1P67809 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.65■□□□□ 0.9
YBX1P67809 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.65■□□□□ 0.9
YBX1P67809 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
YBX1P67809 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
YBX1P67809 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
YBX1P67809 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
YBX1P67809 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.65■□□□□ 0.9
YBX1P67809 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
YBX1P67809 MIR6821-201ENST00000617625 74 ntBASIC20.65■□□□□ 0.9
YBX1P67809 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YBX1P67809 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YBX1P67809 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.65■□□□□ 0.9
YBX1P67809 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
YBX1P67809 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.64■□□□□ 0.9
YBX1P67809 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.64■□□□□ 0.9
YBX1P67809 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.64■□□□□ 0.89
YBX1P67809 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YBX1P67809 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
YBX1P67809 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
YBX1P67809 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YBX1P67809 CCDC92B-201ENST00000575506 885 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms