Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRA2BP62995 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.05■□□□□ 0.8
TRA2BP62995 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRA2BP62995 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.05■□□□□ 0.8
TRA2BP62995 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.05■□□□□ 0.8
TRA2BP62995 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.05■□□□□ 0.8
TRA2BP62995 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.05■□□□□ 0.8
TRA2BP62995 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.05■□□□□ 0.8
TRA2BP62995 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRA2BP62995 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TRA2BP62995 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRA2BP62995 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRA2BP62995 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.04■□□□□ 0.8
TRA2BP62995 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRA2BP62995 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRA2BP62995 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRA2BP62995 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRA2BP62995 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRA2BP62995 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRA2BP62995 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.04■□□□□ 0.8
TRA2BP62995 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRA2BP62995 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRA2BP62995 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRA2BP62995 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRA2BP62995 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRA2BP62995 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRA2BP62995 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRA2BP62995 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRA2BP62995 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRA2BP62995 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRA2BP62995 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.03■□□□□ 0.8
TRA2BP62995 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.03■□□□□ 0.8
TRA2BP62995 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRA2BP62995 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRA2BP62995 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.03■□□□□ 0.8
TRA2BP62995 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRA2BP62995 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRA2BP62995 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRA2BP62995 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRA2BP62995 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRA2BP62995 AC027612.3-201ENST00000413684 1047 ntBASIC20.03■□□□□ 0.8
TRA2BP62995 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRA2BP62995 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRA2BP62995 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.03■□□□□ 0.8
TRA2BP62995 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRA2BP62995 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRA2BP62995 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.03■□□□□ 0.8
TRA2BP62995 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRA2BP62995 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRA2BP62995 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.03■□□□□ 0.8
TRA2BP62995 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
TRA2BP62995 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.02■□□□□ 0.8
TRA2BP62995 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRA2BP62995 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.02■□□□□ 0.8
TRA2BP62995 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.02■□□□□ 0.8
TRA2BP62995 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.02■□□□□ 0.8
TRA2BP62995 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.02■□□□□ 0.8
TRA2BP62995 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRA2BP62995 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRA2BP62995 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.02■□□□□ 0.8
TRA2BP62995 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.02■□□□□ 0.8
TRA2BP62995 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRA2BP62995 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRA2BP62995 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRA2BP62995 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRA2BP62995 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRA2BP62995 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRA2BP62995 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRA2BP62995 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRA2BP62995 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.01■□□□□ 0.79
TRA2BP62995 FEM1AP4-201ENST00000443167 1987 ntBASIC20.01■□□□□ 0.79
TRA2BP62995 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRA2BP62995 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.01■□□□□ 0.79
TRA2BP62995 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRA2BP62995 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TRA2BP62995 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.01■□□□□ 0.79
TRA2BP62995 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRA2BP62995 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.01■□□□□ 0.79
TRA2BP62995 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRA2BP62995 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.01■□□□□ 0.79
TRA2BP62995 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.01■□□□□ 0.79
TRA2BP62995 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRA2BP62995 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.01■□□□□ 0.79
TRA2BP62995 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TRA2BP62995 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRA2BP62995 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRA2BP62995 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20■□□□□ 0.79
TRA2BP62995 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRA2BP62995 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRA2BP62995 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20■□□□□ 0.79
TRA2BP62995 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20■□□□□ 0.79
TRA2BP62995 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRA2BP62995 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRA2BP62995 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20■□□□□ 0.79
TRA2BP62995 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRA2BP62995 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRA2BP62995 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRA2BP62995 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRA2BP62995 MIR6084-201ENST00000622012 110 ntBASIC20■□□□□ 0.79
TRA2BP62995 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms