Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SRP54P61011 CLDN5-201ENST00000403084 2357 ntBASIC20.92■□□□□ 0.94
SRP54P61011 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRP54P61011 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRP54P61011 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRP54P61011 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRP54P61011 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRP54P61011 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRP54P61011 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRP54P61011 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRP54P61011 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SRP54P61011 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SRP54P61011 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.91■□□□□ 0.94
SRP54P61011 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SRP54P61011 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SRP54P61011 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SRP54P61011 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRP54P61011 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.9■□□□□ 0.94
SRP54P61011 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.9■□□□□ 0.94
SRP54P61011 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRP54P61011 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.9■□□□□ 0.94
SRP54P61011 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRP54P61011 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRP54P61011 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRP54P61011 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SRP54P61011 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.9■□□□□ 0.94
SRP54P61011 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.9■□□□□ 0.94
SRP54P61011 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRP54P61011 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.9■□□□□ 0.94
SRP54P61011 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.9■□□□□ 0.94
SRP54P61011 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
SRP54P61011 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.9■□□□□ 0.94
SRP54P61011 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SRP54P61011 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRP54P61011 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.9■□□□□ 0.94
SRP54P61011 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRP54P61011 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRP54P61011 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SRP54P61011 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SRP54P61011 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.9■□□□□ 0.94
SRP54P61011 AC127496.7-201ENST00000625110 1798 ntBASIC20.9■□□□□ 0.94
SRP54P61011 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.9■□□□□ 0.94
SRP54P61011 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SRP54P61011 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SRP54P61011 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.89■□□□□ 0.93
SRP54P61011 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.89■□□□□ 0.93
SRP54P61011 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRP54P61011 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.89■□□□□ 0.93
SRP54P61011 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SRP54P61011 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SRP54P61011 AC007322.1-201ENST00000426983 750 ntBASIC20.89■□□□□ 0.93
SRP54P61011 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.89■□□□□ 0.93
SRP54P61011 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.89■□□□□ 0.93
SRP54P61011 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.89■□□□□ 0.93
SRP54P61011 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SRP54P61011 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SRP54P61011 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
SRP54P61011 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRP54P61011 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRP54P61011 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SRP54P61011 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRP54P61011 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SRP54P61011 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRP54P61011 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SRP54P61011 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRP54P61011 AC092053.2-201ENST00000640557 1818 ntBASIC20.88■□□□□ 0.93
SRP54P61011 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRP54P61011 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRP54P61011 NCF1B-203ENST00000435988 1254 ntBASIC20.88■□□□□ 0.93
SRP54P61011 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SRP54P61011 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.88■□□□□ 0.93
SRP54P61011 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.88■□□□□ 0.93
SRP54P61011 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.88■□□□□ 0.93
SRP54P61011 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SRP54P61011 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRP54P61011 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRP54P61011 AC080038.3-201ENST00000623346 1952 ntBASIC20.88■□□□□ 0.93
SRP54P61011 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRP54P61011 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.88■□□□□ 0.93
SRP54P61011 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SRP54P61011 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.88■□□□□ 0.93
SRP54P61011 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRP54P61011 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRP54P61011 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.87■□□□□ 0.93
SRP54P61011 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRP54P61011 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRP54P61011 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRP54P61011 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.87■□□□□ 0.93
SRP54P61011 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.87■□□□□ 0.93
SRP54P61011 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.87■□□□□ 0.93
SRP54P61011 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRP54P61011 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.87■□□□□ 0.93
SRP54P61011 SLC7A5P2-201ENST00000553010 536 ntBASIC20.87■□□□□ 0.93
SRP54P61011 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.87■□□□□ 0.93
SRP54P61011 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SRP54P61011 AC010536.3-201ENST00000620306 533 ntBASIC20.87■□□□□ 0.93
SRP54P61011 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRP54P61011 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRP54P61011 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SRP54P61011 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms