Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.66■□□□□ 0.9
AP1S2P56377 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S2P56377 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S2P56377 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S2P56377 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.66■□□□□ 0.9
AP1S2P56377 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S2P56377 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S2P56377 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.66■□□□□ 0.9
AP1S2P56377 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S2P56377 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
AP1S2P56377 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S2P56377 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S2P56377 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.65■□□□□ 0.9
AP1S2P56377 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S2P56377 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S2P56377 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
AP1S2P56377 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S2P56377 AC027612.3-201ENST00000413684 1047 ntBASIC20.65■□□□□ 0.9
AP1S2P56377 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.65■□□□□ 0.9
AP1S2P56377 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.65■□□□□ 0.9
AP1S2P56377 PKD1P6-201ENST00000343738 4769 ntBASIC20.65■□□□□ 0.9
AP1S2P56377 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S2P56377 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S2P56377 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.65■□□□□ 0.9
AP1S2P56377 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S2P56377 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.64■□□□□ 0.9
AP1S2P56377 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.64■□□□□ 0.9
AP1S2P56377 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S2P56377 AC026310.3-201ENST00000625186 2373 ntBASIC20.64■□□□□ 0.89
AP1S2P56377 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.64■□□□□ 0.89
AP1S2P56377 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.64■□□□□ 0.89
AP1S2P56377 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.64■□□□□ 0.89
AP1S2P56377 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S2P56377 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S2P56377 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S2P56377 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S2P56377 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S2P56377 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.64■□□□□ 0.89
AP1S2P56377 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S2P56377 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
AP1S2P56377 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S2P56377 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.63■□□□□ 0.89
AP1S2P56377 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.63■□□□□ 0.89
AP1S2P56377 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S2P56377 AC007375.3-201ENST00000600936 2314 ntBASIC20.63■□□□□ 0.89
AP1S2P56377 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S2P56377 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S2P56377 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.63■□□□□ 0.89
AP1S2P56377 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.63■□□□□ 0.89
AP1S2P56377 MIR6084-201ENST00000622012 110 ntBASIC20.63■□□□□ 0.89
AP1S2P56377 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.63■□□□□ 0.89
AP1S2P56377 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S2P56377 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
AP1S2P56377 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S2P56377 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S2P56377 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S2P56377 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S2P56377 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
AP1S2P56377 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S2P56377 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.62■□□□□ 0.89
AP1S2P56377 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S2P56377 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
AP1S2P56377 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S2P56377 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
AP1S2P56377 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
AP1S2P56377 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S2P56377 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S2P56377 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S2P56377 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S2P56377 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
AP1S2P56377 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.62■□□□□ 0.89
AP1S2P56377 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S2P56377 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.61■□□□□ 0.89
AP1S2P56377 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.61■□□□□ 0.89
AP1S2P56377 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S2P56377 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
AP1S2P56377 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S2P56377 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
AP1S2P56377 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
AP1S2P56377 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S2P56377 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S2P56377 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S2P56377 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.61■□□□□ 0.89
AP1S2P56377 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.61■□□□□ 0.89
AP1S2P56377 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S2P56377 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.61■□□□□ 0.89
AP1S2P56377 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S2P56377 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S2P56377 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S2P56377 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP1S2P56377 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
AP1S2P56377 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S2P56377 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S2P56377 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S2P56377 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S2P56377 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S2P56377 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S2P56377 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S2P56377 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S2P56377 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms