Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDH6P55285 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDH6P55285 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDH6P55285 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.05■■□□□ 1.12
CDH6P55285 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.05■■□□□ 1.12
CDH6P55285 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDH6P55285 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.05■■□□□ 1.12
CDH6P55285 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CDH6P55285 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDH6P55285 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH6P55285 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH6P55285 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH6P55285 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.04■■□□□ 1.12
CDH6P55285 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.04■■□□□ 1.12
CDH6P55285 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CDH6P55285 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
CDH6P55285 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDH6P55285 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.04■■□□□ 1.12
CDH6P55285 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.04■■□□□ 1.12
CDH6P55285 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.04■■□□□ 1.12
CDH6P55285 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDH6P55285 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH6P55285 AC005224.4-201ENST00000583262 1652 ntBASIC22.04■■□□□ 1.12
CDH6P55285 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CDH6P55285 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH6P55285 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
CDH6P55285 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDH6P55285 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.03■■□□□ 1.12
CDH6P55285 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.03■■□□□ 1.12
CDH6P55285 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.03■■□□□ 1.12
CDH6P55285 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDH6P55285 AC055733.4-201ENST00000638462 1354 ntBASIC22.03■■□□□ 1.12
CDH6P55285 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDH6P55285 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.03■■□□□ 1.12
CDH6P55285 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDH6P55285 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.03■■□□□ 1.12
CDH6P55285 AC012414.1-201ENST00000556676 535 ntBASIC22.03■■□□□ 1.12
CDH6P55285 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDH6P55285 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.03■■□□□ 1.12
CDH6P55285 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CDH6P55285 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.03■■□□□ 1.12
CDH6P55285 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.03■■□□□ 1.12
CDH6P55285 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.03■■□□□ 1.12
CDH6P55285 AC005229.4-201ENST00000610085 2198 ntBASIC22.02■■□□□ 1.12
CDH6P55285 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.02■■□□□ 1.12
CDH6P55285 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH6P55285 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDH6P55285 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH6P55285 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH6P55285 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CDH6P55285 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH6P55285 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.02■■□□□ 1.12
CDH6P55285 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH6P55285 AC105265.2-201ENST00000467189 838 ntBASIC22.02■■□□□ 1.12
CDH6P55285 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.02■■□□□ 1.12
CDH6P55285 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.02■■□□□ 1.12
CDH6P55285 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDH6P55285 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDH6P55285 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.01■■□□□ 1.11
CDH6P55285 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDH6P55285 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.01■■□□□ 1.11
CDH6P55285 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.01■■□□□ 1.11
CDH6P55285 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.01■■□□□ 1.11
CDH6P55285 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDH6P55285 FEM1AP4-201ENST00000443167 1987 ntBASIC22.01■■□□□ 1.11
CDH6P55285 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.01■■□□□ 1.11
CDH6P55285 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDH6P55285 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDH6P55285 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CDH6P55285 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDH6P55285 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22■■□□□ 1.11
CDH6P55285 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDH6P55285 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22■■□□□ 1.11
CDH6P55285 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22■■□□□ 1.11
CDH6P55285 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CDH6P55285 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CDH6P55285 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22■■□□□ 1.11
CDH6P55285 AL354811.1-201ENST00000610286 706 ntBASIC22■■□□□ 1.11
CDH6P55285 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDH6P55285 AF106564.1-201ENST00000607058 2553 ntBASIC22■■□□□ 1.11
CDH6P55285 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDH6P55285 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDH6P55285 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDH6P55285 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDH6P55285 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDH6P55285 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.99■■□□□ 1.11
CDH6P55285 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDH6P55285 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDH6P55285 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDH6P55285 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDH6P55285 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDH6P55285 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.99■■□□□ 1.11
CDH6P55285 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CDH6P55285 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.98■■□□□ 1.11
CDH6P55285 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH6P55285 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH6P55285 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.98■■□□□ 1.11
CDH6P55285 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.98■■□□□ 1.11
CDH6P55285 MIR6084-201ENST00000622012 110 ntBASIC21.98■■□□□ 1.11
CDH6P55285 AL358852.1-201ENST00000623174 1268 ntBASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms