Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 pRNA.11-201ENST00000618423 90 ntBASIC18.84■□□□□ 0.61
GBX2P52951 pRNA.13-201ENST00000619112 90 ntBASIC18.84■□□□□ 0.61
GBX2P52951 AC087239.1-201ENST00000622671 572 ntBASIC18.84■□□□□ 0.61
GBX2P52951 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GBX2P52951 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.84■□□□□ 0.61
GBX2P52951 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GBX2P52951 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GBX2P52951 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GBX2P52951 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.84■□□□□ 0.61
GBX2P52951 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.83■□□□□ 0.61
GBX2P52951 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.83■□□□□ 0.61
GBX2P52951 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
GBX2P52951 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GBX2P52951 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.83■□□□□ 0.61
GBX2P52951 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GBX2P52951 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.83■□□□□ 0.6
GBX2P52951 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.83■□□□□ 0.6
GBX2P52951 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GBX2P52951 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.83■□□□□ 0.6
GBX2P52951 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GBX2P52951 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GBX2P52951 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GBX2P52951 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GBX2P52951 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GBX2P52951 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GBX2P52951 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GBX2P52951 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GBX2P52951 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GBX2P52951 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
GBX2P52951 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.82■□□□□ 0.6
GBX2P52951 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.82■□□□□ 0.6
GBX2P52951 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.82■□□□□ 0.6
GBX2P52951 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GBX2P52951 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GBX2P52951 AC239859.2-201ENST00000444165 318 ntBASIC18.82■□□□□ 0.6
GBX2P52951 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.82■□□□□ 0.6
GBX2P52951 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GBX2P52951 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GBX2P52951 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GBX2P52951 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GBX2P52951 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
GBX2P52951 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GBX2P52951 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GBX2P52951 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GBX2P52951 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GBX2P52951 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GBX2P52951 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GBX2P52951 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.81■□□□□ 0.6
GBX2P52951 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
GBX2P52951 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
GBX2P52951 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GBX2P52951 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GBX2P52951 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GBX2P52951 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GBX2P52951 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.81■□□□□ 0.6
GBX2P52951 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GBX2P52951 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
GBX2P52951 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
GBX2P52951 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.8■□□□□ 0.6
GBX2P52951 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
GBX2P52951 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.8■□□□□ 0.6
GBX2P52951 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GBX2P52951 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GBX2P52951 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GBX2P52951 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GBX2P52951 MIR6724-1-201ENST00000616420 92 ntBASIC18.8■□□□□ 0.6
GBX2P52951 MIR6724-2-201ENST00000616483 92 ntBASIC18.8■□□□□ 0.6
GBX2P52951 MIR6724-4-201ENST00000617390 92 ntBASIC18.8■□□□□ 0.6
GBX2P52951 MIR6724-3-201ENST00000622482 92 ntBASIC18.8■□□□□ 0.6
GBX2P52951 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
GBX2P52951 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GBX2P52951 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
GBX2P52951 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GBX2P52951 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.79■□□□□ 0.6
GBX2P52951 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GBX2P52951 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
GBX2P52951 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GBX2P52951 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
GBX2P52951 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.79■□□□□ 0.6
GBX2P52951 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GBX2P52951 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.79■□□□□ 0.6
GBX2P52951 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.79■□□□□ 0.6
GBX2P52951 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
GBX2P52951 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.78■□□□□ 0.6
GBX2P52951 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GBX2P52951 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.78■□□□□ 0.6
GBX2P52951 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms