Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.08■■□□□ 1.28
CDR1P51861 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CDR1P51861 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.08■■□□□ 1.28
CDR1P51861 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CDR1P51861 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.08■■□□□ 1.28
CDR1P51861 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDR1P51861 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDR1P51861 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDR1P51861 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDR1P51861 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CDR1P51861 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.07■■□□□ 1.28
CDR1P51861 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.07■■□□□ 1.28
CDR1P51861 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.07■■□□□ 1.28
CDR1P51861 TERF1P2-201ENST00000583350 1212 ntBASIC23.07■■□□□ 1.28
CDR1P51861 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDR1P51861 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.07■■□□□ 1.28
CDR1P51861 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
CDR1P51861 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDR1P51861 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDR1P51861 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDR1P51861 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDR1P51861 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDR1P51861 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDR1P51861 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDR1P51861 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.06■■□□□ 1.28
CDR1P51861 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.06■■□□□ 1.28
CDR1P51861 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.06■■□□□ 1.28
CDR1P51861 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.06■■□□□ 1.28
CDR1P51861 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDR1P51861 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDR1P51861 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDR1P51861 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CDR1P51861 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDR1P51861 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.06■■□□□ 1.28
CDR1P51861 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDR1P51861 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.05■■□□□ 1.28
CDR1P51861 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDR1P51861 BX005040.4-201ENST00000637145 1518 ntBASIC23.05■■□□□ 1.28
CDR1P51861 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.05■■□□□ 1.28
CDR1P51861 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.05■■□□□ 1.28
CDR1P51861 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.05■■□□□ 1.28
CDR1P51861 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.05■■□□□ 1.28
CDR1P51861 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
CDR1P51861 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDR1P51861 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDR1P51861 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDR1P51861 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDR1P51861 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CDR1P51861 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CDR1P51861 AC242852.2-201ENST00000615738 1807 ntBASIC23.04■■□□□ 1.28
CDR1P51861 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDR1P51861 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDR1P51861 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDR1P51861 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDR1P51861 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.04■■□□□ 1.28
CDR1P51861 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.04■■□□□ 1.28
CDR1P51861 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDR1P51861 TPRG1LP1-201ENST00000598702 760 ntBASIC23.04■■□□□ 1.28
CDR1P51861 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDR1P51861 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDR1P51861 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDR1P51861 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDR1P51861 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.03■■□□□ 1.28
CDR1P51861 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CDR1P51861 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.03■■□□□ 1.28
CDR1P51861 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.03■■□□□ 1.28
CDR1P51861 AC087742.1-201ENST00000575880 1738 ntBASIC23.03■■□□□ 1.28
CDR1P51861 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDR1P51861 AC092437.1-201ENST00000624794 1048 ntBASIC23.03■■□□□ 1.28
CDR1P51861 AC068587.7-201ENST00000641602 218 ntBASIC23.03■■□□□ 1.28
CDR1P51861 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDR1P51861 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDR1P51861 AC007375.3-201ENST00000600936 2314 ntBASIC23.03■■□□□ 1.28
CDR1P51861 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDR1P51861 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDR1P51861 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CDR1P51861 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDR1P51861 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CDR1P51861 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.02■■□□□ 1.28
CDR1P51861 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDR1P51861 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDR1P51861 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.02■■□□□ 1.28
CDR1P51861 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDR1P51861 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDR1P51861 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDR1P51861 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDR1P51861 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.02■■□□□ 1.28
CDR1P51861 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDR1P51861 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.02■■□□□ 1.28
CDR1P51861 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDR1P51861 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CDR1P51861 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDR1P51861 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDR1P51861 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CDR1P51861 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDR1P51861 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.01■■□□□ 1.27
CDR1P51861 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDR1P51861 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDR1P51861 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.01■■□□□ 1.27
CDR1P51861 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms