Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5CP51148 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RAB5CP51148 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB5CP51148 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
RAB5CP51148 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5CP51148 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5CP51148 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.04■□□□□ 0.32
RAB5CP51148 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RAB5CP51148 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB5CP51148 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5CP51148 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5CP51148 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5CP51148 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5CP51148 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5CP51148 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB5CP51148 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB5CP51148 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
RAB5CP51148 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5CP51148 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RAB5CP51148 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5CP51148 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB5CP51148 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5CP51148 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB5CP51148 AL049796.1-201ENST00000565336 1766 ntBASIC17.03■□□□□ 0.32
RAB5CP51148 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5CP51148 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5CP51148 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RAB5CP51148 RPS2P35-201ENST00000443417 897 ntBASIC17.03■□□□□ 0.32
RAB5CP51148 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB5CP51148 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5CP51148 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB5CP51148 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5CP51148 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB5CP51148 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB5CP51148 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
RAB5CP51148 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5CP51148 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5CP51148 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5CP51148 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5CP51148 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAB5CP51148 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RAB5CP51148 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB5CP51148 FP325331.1-202ENST00000623531 1380 ntBASIC17.02■□□□□ 0.32
RAB5CP51148 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB5CP51148 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB5CP51148 AC026471.1-201ENST00000564629 3026 ntBASIC17.02■□□□□ 0.32
RAB5CP51148 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB5CP51148 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB5CP51148 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB5CP51148 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.02■□□□□ 0.32
RAB5CP51148 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RAB5CP51148 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB5CP51148 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB5CP51148 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB5CP51148 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB5CP51148 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB5CP51148 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB5CP51148 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
RAB5CP51148 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB5CP51148 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RAB5CP51148 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
RAB5CP51148 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB5CP51148 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.02■□□□□ 0.31
RAB5CP51148 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RAB5CP51148 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
RAB5CP51148 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB5CP51148 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.02■□□□□ 0.31
RAB5CP51148 AC087289.5-201ENST00000586076 3175 ntBASIC17.01■□□□□ 0.31
RAB5CP51148 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5CP51148 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5CP51148 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB5CP51148 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5CP51148 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5CP51148 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
RAB5CP51148 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5CP51148 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5CP51148 AC087393.1-201ENST00000582896 145 ntBASIC17.01■□□□□ 0.31
RAB5CP51148 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5CP51148 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB5CP51148 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RAB5CP51148 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
RAB5CP51148 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5CP51148 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB5CP51148 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB5CP51148 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5CP51148 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5CP51148 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5CP51148 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5CP51148 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB5CP51148 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RAB5CP51148 C17orf82-201ENST00000623772 1530 ntBASIC17.01■□□□□ 0.31
RAB5CP51148 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5CP51148 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB5CP51148 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
RAB5CP51148 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5CP51148 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5CP51148 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB5CP51148 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17■□□□□ 0.31
RAB5CP51148 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RAB5CP51148 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms