Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LHX2P50458 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.02■□□□□ 0.64
LHX2P50458 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LHX2P50458 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.02■□□□□ 0.64
LHX2P50458 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LHX2P50458 ECEL1P1-201ENST00000373592 1742 ntBASIC19.02■□□□□ 0.63
LHX2P50458 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.02■□□□□ 0.63
LHX2P50458 AC010542.4-201ENST00000563151 1910 ntBASIC19.02■□□□□ 0.63
LHX2P50458 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX2P50458 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.01■□□□□ 0.63
LHX2P50458 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX2P50458 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX2P50458 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.01■□□□□ 0.63
LHX2P50458 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.01■□□□□ 0.63
LHX2P50458 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LHX2P50458 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LHX2P50458 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX2P50458 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX2P50458 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX2P50458 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.01■□□□□ 0.63
LHX2P50458 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LHX2P50458 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.01■□□□□ 0.63
LHX2P50458 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LHX2P50458 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LHX2P50458 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19■□□□□ 0.63
LHX2P50458 AC012676.1-201ENST00000574705 1949 ntBASIC19■□□□□ 0.63
LHX2P50458 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
LHX2P50458 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LHX2P50458 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19■□□□□ 0.63
LHX2P50458 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19■□□□□ 0.63
LHX2P50458 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19■□□□□ 0.63
LHX2P50458 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LHX2P50458 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LHX2P50458 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LHX2P50458 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LHX2P50458 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LHX2P50458 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19■□□□□ 0.63
LHX2P50458 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LHX2P50458 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX2P50458 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
LHX2P50458 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LHX2P50458 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LHX2P50458 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.99■□□□□ 0.63
LHX2P50458 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.99■□□□□ 0.63
LHX2P50458 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX2P50458 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.99■□□□□ 0.63
LHX2P50458 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.99■□□□□ 0.63
LHX2P50458 SLC7A5P2-201ENST00000553010 536 ntBASIC18.99■□□□□ 0.63
LHX2P50458 AC008175.2-201ENST00000612840 297 ntBASIC18.99■□□□□ 0.63
LHX2P50458 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LHX2P50458 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LHX2P50458 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.99■□□□□ 0.63
LHX2P50458 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LHX2P50458 AC133561.1-201ENST00000568600 2415 ntBASIC18.99■□□□□ 0.63
LHX2P50458 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LHX2P50458 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LHX2P50458 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX2P50458 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.98■□□□□ 0.63
LHX2P50458 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX2P50458 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
LHX2P50458 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX2P50458 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.98■□□□□ 0.63
LHX2P50458 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX2P50458 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX2P50458 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX2P50458 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.98■□□□□ 0.63
LHX2P50458 AC026185.1-201ENST00000445748 174 ntBASIC18.98■□□□□ 0.63
LHX2P50458 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
LHX2P50458 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.98■□□□□ 0.63
LHX2P50458 SLC7A5P1-201ENST00000568957 537 ntBASIC18.98■□□□□ 0.63
LHX2P50458 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.98■□□□□ 0.63
LHX2P50458 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX2P50458 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LHX2P50458 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LHX2P50458 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
LHX2P50458 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LHX2P50458 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LHX2P50458 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX2P50458 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX2P50458 POU5F1P4-201ENST00000413175 1085 ntBASIC18.97■□□□□ 0.63
LHX2P50458 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LHX2P50458 DUX4L16-201ENST00000555130 1264 ntBASIC18.97■□□□□ 0.63
LHX2P50458 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LHX2P50458 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.97■□□□□ 0.63
LHX2P50458 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LHX2P50458 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX2P50458 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.97■□□□□ 0.63
LHX2P50458 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.97■□□□□ 0.63
LHX2P50458 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX2P50458 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LHX2P50458 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
LHX2P50458 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.96■□□□□ 0.63
LHX2P50458 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX2P50458 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX2P50458 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX2P50458 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LHX2P50458 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX2P50458 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LHX2P50458 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.96■□□□□ 0.63
LHX2P50458 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms