Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.52■■□□□ 1.04
GRIA1P42261 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GRIA1P42261 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
GRIA1P42261 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GRIA1P42261 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
GRIA1P42261 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
GRIA1P42261 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
GRIA1P42261 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
GRIA1P42261 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
GRIA1P42261 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.51■■□□□ 1.03
GRIA1P42261 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
GRIA1P42261 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GRIA1P42261 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
GRIA1P42261 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.51■■□□□ 1.03
GRIA1P42261 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GRIA1P42261 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
GRIA1P42261 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.51■■□□□ 1.03
GRIA1P42261 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.51■■□□□ 1.03
GRIA1P42261 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GRIA1P42261 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.51■■□□□ 1.03
GRIA1P42261 AL355001.2-201ENST00000620617 1191 ntBASIC21.51■■□□□ 1.03
GRIA1P42261 AL136967.2-201ENST00000623968 743 ntBASIC21.51■■□□□ 1.03
GRIA1P42261 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.51■■□□□ 1.03
GRIA1P42261 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
GRIA1P42261 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GRIA1P42261 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.5■■□□□ 1.03
GRIA1P42261 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.5■■□□□ 1.03
GRIA1P42261 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.5■■□□□ 1.03
GRIA1P42261 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
GRIA1P42261 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
GRIA1P42261 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.5■■□□□ 1.03
GRIA1P42261 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GRIA1P42261 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA1P42261 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GRIA1P42261 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.49■■□□□ 1.03
GRIA1P42261 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA1P42261 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.49■■□□□ 1.03
GRIA1P42261 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.49■■□□□ 1.03
GRIA1P42261 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA1P42261 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
GRIA1P42261 AC105233.4-201ENST00000642045 216 ntBASIC21.49■■□□□ 1.03
GRIA1P42261 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.49■■□□□ 1.03
GRIA1P42261 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA1P42261 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
GRIA1P42261 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
GRIA1P42261 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.49■■□□□ 1.03
GRIA1P42261 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA1P42261 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GRIA1P42261 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GRIA1P42261 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA1P42261 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA1P42261 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA1P42261 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.48■■□□□ 1.03
GRIA1P42261 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.48■■□□□ 1.03
GRIA1P42261 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA1P42261 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.48■■□□□ 1.03
GRIA1P42261 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.48■■□□□ 1.03
GRIA1P42261 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.48■■□□□ 1.03
GRIA1P42261 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
GRIA1P42261 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA1P42261 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA1P42261 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GRIA1P42261 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
GRIA1P42261 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.48■■□□□ 1.03
GRIA1P42261 RASA4CP-201ENST00000424092 1398 ntBASIC21.48■■□□□ 1.03
GRIA1P42261 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIA1P42261 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.47■■□□□ 1.03
GRIA1P42261 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.47■■□□□ 1.03
GRIA1P42261 SUDS3P1-201ENST00000505831 966 ntBASIC21.47■■□□□ 1.03
GRIA1P42261 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIA1P42261 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
GRIA1P42261 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.47■■□□□ 1.03
GRIA1P42261 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
GRIA1P42261 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.47■■□□□ 1.03
GRIA1P42261 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.46■■□□□ 1.03
GRIA1P42261 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIA1P42261 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GRIA1P42261 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.46■■□□□ 1.03
GRIA1P42261 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
GRIA1P42261 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
GRIA1P42261 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.46■■□□□ 1.03
GRIA1P42261 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.46■■□□□ 1.03
GRIA1P42261 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.46■■□□□ 1.03
GRIA1P42261 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GRIA1P42261 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms