Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RPL13AP40429 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC14.63□□□□□ -0.07
RPL13AP40429 HES4-204ENST00000484667 667 ntTSL 3 BASIC14.63□□□□□ -0.07
RPL13AP40429 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 GFER-205ENST00000569451 517 ntTSL 5 BASIC14.63□□□□□ -0.07
RPL13AP40429 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC14.63□□□□□ -0.07
RPL13AP40429 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC14.63□□□□□ -0.07
RPL13AP40429 AC012354.3-201ENST00000623734 483 ntBASIC14.63□□□□□ -0.07
RPL13AP40429 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RPL13AP40429 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RPL13AP40429 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.63□□□□□ -0.07
RPL13AP40429 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RPL13AP40429 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RPL13AP40429 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPL13AP40429 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RPL13AP40429 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL13AP40429 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL13AP40429 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL13AP40429 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL13AP40429 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL13AP40429 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL13AP40429 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL13AP40429 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPL13AP40429 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL13AP40429 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC14.62□□□□□ -0.07
RPL13AP40429 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RPL13AP40429 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RPL13AP40429 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
RPL13AP40429 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC14.62□□□□□ -0.07
RPL13AP40429 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
RPL13AP40429 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.62□□□□□ -0.07
RPL13AP40429 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
RPL13AP40429 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
RPL13AP40429 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RPL13AP40429 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RPL13AP40429 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
RPL13AP40429 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL13AP40429 AC020763.4-201ENST00000623414 4170 ntBASIC14.62□□□□□ -0.07
RPL13AP40429 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL13AP40429 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL13AP40429 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL13AP40429 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL13AP40429 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL13AP40429 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC14.61□□□□□ -0.07
RPL13AP40429 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL13AP40429 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
RPL13AP40429 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RPL13AP40429 CD37-213ENST00000598095 1598 ntTSL 2 BASIC14.61□□□□□ -0.07
RPL13AP40429 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL13AP40429 AC010542.4-201ENST00000563151 1910 ntBASIC14.61□□□□□ -0.07
RPL13AP40429 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RPL13AP40429 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL13AP40429 PFN2-211ENST00000489155 636 ntTSL 4 BASIC14.61□□□□□ -0.07
RPL13AP40429 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RPL13AP40429 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RPL13AP40429 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RPL13AP40429 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.61□□□□□ -0.07
RPL13AP40429 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RPL13AP40429 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC14.61□□□□□ -0.07
RPL13AP40429 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.61□□□□□ -0.07
RPL13AP40429 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL13AP40429 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL13AP40429 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.6□□□□□ -0.07
RPL13AP40429 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL13AP40429 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.6□□□□□ -0.07
RPL13AP40429 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL13AP40429 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL13AP40429 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL13AP40429 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RPL13AP40429 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL13AP40429 RP9P-202ENST00000450133 1212 ntBASIC14.6□□□□□ -0.07
RPL13AP40429 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL13AP40429 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RPL13AP40429 AL157384.1-201ENST00000445995 2473 ntBASIC14.6□□□□□ -0.07
RPL13AP40429 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
RPL13AP40429 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL13AP40429 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL13AP40429 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL13AP40429 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL13AP40429 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
RPL13AP40429 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL13AP40429 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL13AP40429 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL13AP40429 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPL13AP40429 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPL13AP40429 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms