Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
ATP6V1AP38606 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ATP6V1AP38606 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
ATP6V1AP38606 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
ATP6V1AP38606 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ATP6V1AP38606 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC27.27■■□□□ 1.96
ATP6V1AP38606 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC27.27■■□□□ 1.96
ATP6V1AP38606 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC27.27■■□□□ 1.96
ATP6V1AP38606 INO80E-214ENST00000620599 515 ntTSL 2 BASIC27.27■■□□□ 1.96
ATP6V1AP38606 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
ATP6V1AP38606 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ATP6V1AP38606 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC27.27■■□□□ 1.96
ATP6V1AP38606 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC27.26■■□□□ 1.95
ATP6V1AP38606 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
ATP6V1AP38606 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ATP6V1AP38606 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC27.26■■□□□ 1.95
ATP6V1AP38606 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ATP6V1AP38606 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ATP6V1AP38606 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC27.26■■□□□ 1.95
ATP6V1AP38606 OR2A1-AS1-201ENST00000462305 773 ntBASIC27.26■■□□□ 1.95
ATP6V1AP38606 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC27.26■■□□□ 1.95
ATP6V1AP38606 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
ATP6V1AP38606 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ATP6V1AP38606 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC27.25■■□□□ 1.95
ATP6V1AP38606 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ATP6V1AP38606 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ATP6V1AP38606 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ATP6V1AP38606 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC27.25■■□□□ 1.95
ATP6V1AP38606 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC27.25■■□□□ 1.95
ATP6V1AP38606 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC27.25■■□□□ 1.95
ATP6V1AP38606 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC27.25■■□□□ 1.95
ATP6V1AP38606 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC27.25■■□□□ 1.95
ATP6V1AP38606 KRT16P2-201ENST00000414673 1423 ntBASIC27.24■■□□□ 1.95
ATP6V1AP38606 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ATP6V1AP38606 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATP6V1AP38606 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATP6V1AP38606 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC27.24■■□□□ 1.95
ATP6V1AP38606 AL596275.1-201ENST00000423464 877 ntBASIC27.24■■□□□ 1.95
ATP6V1AP38606 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
ATP6V1AP38606 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.24■■□□□ 1.95
ATP6V1AP38606 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
ATP6V1AP38606 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ATP6V1AP38606 MMD2-204ENST00000612910 778 ntTSL 5 BASIC27.23■■□□□ 1.95
ATP6V1AP38606 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ATP6V1AP38606 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
ATP6V1AP38606 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ATP6V1AP38606 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC27.22■■□□□ 1.95
ATP6V1AP38606 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ATP6V1AP38606 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC27.22■■□□□ 1.95
ATP6V1AP38606 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
ATP6V1AP38606 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC27.22■■□□□ 1.95
ATP6V1AP38606 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.22■■□□□ 1.95
ATP6V1AP38606 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ATP6V1AP38606 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
ATP6V1AP38606 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
ATP6V1AP38606 AC137767.1-201ENST00000602918 1920 ntBASIC27.22■■□□□ 1.95
ATP6V1AP38606 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ATP6V1AP38606 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
ATP6V1AP38606 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ATP6V1AP38606 BAALC-201ENST00000297574 801 ntTSL 3 BASIC27.21■■□□□ 1.95
ATP6V1AP38606 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
ATP6V1AP38606 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ATP6V1AP38606 RPS2P4-201ENST00000476944 856 ntBASIC27.21■■□□□ 1.95
ATP6V1AP38606 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC27.21■■□□□ 1.95
ATP6V1AP38606 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC27.21■■□□□ 1.95
ATP6V1AP38606 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC27.21■■□□□ 1.95
ATP6V1AP38606 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC27.21■■□□□ 1.95
ATP6V1AP38606 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.21■■□□□ 1.95
ATP6V1AP38606 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ATP6V1AP38606 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC27.21■■□□□ 1.95
ATP6V1AP38606 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC27.21■■□□□ 1.95
ATP6V1AP38606 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
ATP6V1AP38606 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
ATP6V1AP38606 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC27.2■■□□□ 1.95
ATP6V1AP38606 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ATP6V1AP38606 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
ATP6V1AP38606 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC27.2■■□□□ 1.94
ATP6V1AP38606 UNC93B5-201ENST00000530315 699 ntBASIC27.2■■□□□ 1.94
ATP6V1AP38606 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC27.2■■□□□ 1.94
ATP6V1AP38606 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
ATP6V1AP38606 AC243732.1-201ENST00000612648 864 ntBASIC27.2■■□□□ 1.94
ATP6V1AP38606 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
ATP6V1AP38606 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC27.2■■□□□ 1.94
ATP6V1AP38606 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
ATP6V1AP38606 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC27.19■■□□□ 1.94
ATP6V1AP38606 SERPINH1P1-201ENST00000419794 1249 ntBASIC27.19■■□□□ 1.94
ATP6V1AP38606 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
ATP6V1AP38606 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC27.19■■□□□ 1.94
ATP6V1AP38606 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
ATP6V1AP38606 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
ATP6V1AP38606 PBX1-209ENST00000485769 834 ntTSL 2 BASIC27.19■■□□□ 1.94
ATP6V1AP38606 AC026366.1-201ENST00000488803 879 ntBASIC27.19■■□□□ 1.94
ATP6V1AP38606 CASP6-205ENST00000505486 538 ntTSL 4 BASIC27.19■■□□□ 1.94
ATP6V1AP38606 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC27.19■■□□□ 1.94
ATP6V1AP38606 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC27.19■■□□□ 1.94
ATP6V1AP38606 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC27.19■■□□□ 1.94
ATP6V1AP38606 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ATP6V1AP38606 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
ATP6V1AP38606 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ATP6V1AP38606 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms