Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN6P29350 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN6P29350 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN6P29350 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN6P29350 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN6P29350 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN6P29350 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN6P29350 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PTPN6P29350 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN6P29350 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN6P29350 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN6P29350 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PTPN6P29350 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN6P29350 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PTPN6P29350 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
PTPN6P29350 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN6P29350 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN6P29350 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PTPN6P29350 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN6P29350 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN6P29350 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN6P29350 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN6P29350 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PTPN6P29350 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN6P29350 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN6P29350 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PTPN6P29350 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PTPN6P29350 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PTPN6P29350 AC105265.2-201ENST00000467189 838 ntBASIC20.11■□□□□ 0.81
PTPN6P29350 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PTPN6P29350 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.11■□□□□ 0.81
PTPN6P29350 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.11■□□□□ 0.81
PTPN6P29350 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.11■□□□□ 0.81
PTPN6P29350 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN6P29350 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN6P29350 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN6P29350 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.11■□□□□ 0.81
PTPN6P29350 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PTPN6P29350 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PTPN6P29350 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.1■□□□□ 0.81
PTPN6P29350 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN6P29350 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
PTPN6P29350 ZNRF2P3-201ENST00000424200 374 ntBASIC20.1■□□□□ 0.81
PTPN6P29350 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
PTPN6P29350 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PTPN6P29350 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN6P29350 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN6P29350 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN6P29350 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN6P29350 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN6P29350 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN6P29350 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.09■□□□□ 0.81
PTPN6P29350 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN6P29350 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.09■□□□□ 0.81
PTPN6P29350 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.09■□□□□ 0.81
PTPN6P29350 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN6P29350 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.09■□□□□ 0.81
PTPN6P29350 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN6P29350 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN6P29350 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN6P29350 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.09■□□□□ 0.81
PTPN6P29350 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PTPN6P29350 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN6P29350 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN6P29350 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.09■□□□□ 0.81
PTPN6P29350 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN6P29350 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
PTPN6P29350 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN6P29350 AL157384.1-201ENST00000445995 2473 ntBASIC20.08■□□□□ 0.81
PTPN6P29350 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN6P29350 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN6P29350 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.81
PTPN6P29350 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.81
PTPN6P29350 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.08■□□□□ 0.81
PTPN6P29350 AP005435.1-201ENST00000529293 1178 ntBASIC20.08■□□□□ 0.81
PTPN6P29350 AC126544.1-201ENST00000580842 1059 ntBASIC20.08■□□□□ 0.81
PTPN6P29350 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PTPN6P29350 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN6P29350 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.08■□□□□ 0.8
PTPN6P29350 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PTPN6P29350 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.08■□□□□ 0.8
PTPN6P29350 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.08■□□□□ 0.8
PTPN6P29350 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN6P29350 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN6P29350 AC073130.3-201ENST00000624389 2278 ntBASIC20.07■□□□□ 0.8
PTPN6P29350 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN6P29350 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN6P29350 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN6P29350 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN6P29350 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN6P29350 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.07■□□□□ 0.8
PTPN6P29350 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN6P29350 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.07■□□□□ 0.8
PTPN6P29350 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.07■□□□□ 0.8
PTPN6P29350 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.07■□□□□ 0.8
PTPN6P29350 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.07■□□□□ 0.8
PTPN6P29350 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN6P29350 AL034346.1-201ENST00000568244 1277 ntBASIC20.07■□□□□ 0.8
PTPN6P29350 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN6P29350 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms