Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRPH2P23942 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRPH2P23942 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.22■□□□□ 0.83
PRPH2P23942 AC008406.3-201ENST00000620001 1374 ntBASIC20.22■□□□□ 0.83
PRPH2P23942 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRPH2P23942 EDA-201ENST00000338901 1233 ntBASIC20.22■□□□□ 0.83
PRPH2P23942 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PRPH2P23942 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.22■□□□□ 0.83
PRPH2P23942 AC096631.2-201ENST00000436136 790 ntBASIC20.22■□□□□ 0.83
PRPH2P23942 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
PRPH2P23942 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PRPH2P23942 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRPH2P23942 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRPH2P23942 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRPH2P23942 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.22■□□□□ 0.83
PRPH2P23942 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRPH2P23942 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.21■□□□□ 0.83
PRPH2P23942 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.21■□□□□ 0.83
PRPH2P23942 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.21■□□□□ 0.83
PRPH2P23942 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PRPH2P23942 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.21■□□□□ 0.83
PRPH2P23942 AP001330.3-201ENST00000520123 633 ntBASIC20.21■□□□□ 0.83
PRPH2P23942 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.21■□□□□ 0.83
PRPH2P23942 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.21■□□□□ 0.83
PRPH2P23942 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PRPH2P23942 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRPH2P23942 TSPY26P-201ENST00000476365 1326 ntBASIC20.21■□□□□ 0.83
PRPH2P23942 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PRPH2P23942 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRPH2P23942 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRPH2P23942 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.21■□□□□ 0.83
PRPH2P23942 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRPH2P23942 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PRPH2P23942 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
PRPH2P23942 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRPH2P23942 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.2■□□□□ 0.82
PRPH2P23942 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRPH2P23942 PBX2P1-201ENST00000493219 1291 ntBASIC20.2■□□□□ 0.82
PRPH2P23942 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PRPH2P23942 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.2■□□□□ 0.82
PRPH2P23942 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.2■□□□□ 0.82
PRPH2P23942 AC105233.4-201ENST00000642045 216 ntBASIC20.2■□□□□ 0.82
PRPH2P23942 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PRPH2P23942 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRPH2P23942 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRPH2P23942 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPH2P23942 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPH2P23942 AC005224.4-201ENST00000583262 1652 ntBASIC20.19■□□□□ 0.82
PRPH2P23942 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPH2P23942 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPH2P23942 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.19■□□□□ 0.82
PRPH2P23942 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PRPH2P23942 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRPH2P23942 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRPH2P23942 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.19■□□□□ 0.82
PRPH2P23942 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.19■□□□□ 0.82
PRPH2P23942 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.19■□□□□ 0.82
PRPH2P23942 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.19■□□□□ 0.82
PRPH2P23942 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.19■□□□□ 0.82
PRPH2P23942 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRPH2P23942 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPH2P23942 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.19■□□□□ 0.82
PRPH2P23942 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPH2P23942 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPH2P23942 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRPH2P23942 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRPH2P23942 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.18■□□□□ 0.82
PRPH2P23942 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPH2P23942 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPH2P23942 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PRPH2P23942 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PRPH2P23942 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PRPH2P23942 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPH2P23942 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.18■□□□□ 0.82
PRPH2P23942 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPH2P23942 MIR572-201ENST00000384983 95 ntBASIC20.18■□□□□ 0.82
PRPH2P23942 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPH2P23942 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPH2P23942 AL355001.2-201ENST00000620617 1191 ntBASIC20.18■□□□□ 0.82
PRPH2P23942 RASA4CP-201ENST00000424092 1398 ntBASIC20.18■□□□□ 0.82
PRPH2P23942 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.18■□□□□ 0.82
PRPH2P23942 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPH2P23942 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPH2P23942 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPH2P23942 BX005040.4-201ENST00000637145 1518 ntBASIC20.17■□□□□ 0.82
PRPH2P23942 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRPH2P23942 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPH2P23942 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPH2P23942 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRPH2P23942 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPH2P23942 MIR939-201ENST00000401314 82 ntBASIC20.17■□□□□ 0.82
PRPH2P23942 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.17■□□□□ 0.82
PRPH2P23942 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.17■□□□□ 0.82
PRPH2P23942 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.17■□□□□ 0.82
PRPH2P23942 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.17■□□□□ 0.82
PRPH2P23942 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPH2P23942 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRPH2P23942 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPH2P23942 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPH2P23942 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms