Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL1P22362 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.28■□□□□ 0.52
CCL1P22362 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL1P22362 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL1P22362 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCL1P22362 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL1P22362 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.27■□□□□ 0.52
CCL1P22362 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL1P22362 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL1P22362 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL1P22362 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL1P22362 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL1P22362 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL1P22362 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL1P22362 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.27■□□□□ 0.52
CCL1P22362 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCL1P22362 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCL1P22362 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.27■□□□□ 0.52
CCL1P22362 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL1P22362 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.27■□□□□ 0.52
CCL1P22362 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CCL1P22362 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.27■□□□□ 0.51
CCL1P22362 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.27■□□□□ 0.51
CCL1P22362 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCL1P22362 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCL1P22362 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCL1P22362 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
CCL1P22362 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL1P22362 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL1P22362 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCL1P22362 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.26■□□□□ 0.51
CCL1P22362 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.26■□□□□ 0.51
CCL1P22362 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.26■□□□□ 0.51
CCL1P22362 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL1P22362 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL1P22362 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL1P22362 AC055733.4-201ENST00000638462 1354 ntBASIC18.26■□□□□ 0.51
CCL1P22362 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL1P22362 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCL1P22362 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL1P22362 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.25■□□□□ 0.51
CCL1P22362 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCL1P22362 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL1P22362 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL1P22362 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCL1P22362 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL1P22362 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCL1P22362 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCL1P22362 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.25■□□□□ 0.51
CCL1P22362 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.25■□□□□ 0.51
CCL1P22362 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL1P22362 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCL1P22362 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.25■□□□□ 0.51
CCL1P22362 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.25■□□□□ 0.51
CCL1P22362 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL1P22362 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.25■□□□□ 0.51
CCL1P22362 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.25■□□□□ 0.51
CCL1P22362 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.25■□□□□ 0.51
CCL1P22362 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCL1P22362 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCL1P22362 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.24■□□□□ 0.51
CCL1P22362 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL1P22362 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.24■□□□□ 0.51
CCL1P22362 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.24■□□□□ 0.51
CCL1P22362 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCL1P22362 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
CCL1P22362 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCL1P22362 AC027682.1-201ENST00000562846 899 ntBASIC18.24■□□□□ 0.51
CCL1P22362 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.24■□□□□ 0.51
CCL1P22362 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.24■□□□□ 0.51
CCL1P22362 AC131212.1-201ENST00000613771 668 ntBASIC18.24■□□□□ 0.51
CCL1P22362 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL1P22362 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.24■□□□□ 0.51
CCL1P22362 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCL1P22362 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.24■□□□□ 0.51
CCL1P22362 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.24■□□□□ 0.51
CCL1P22362 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL1P22362 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCL1P22362 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
CCL1P22362 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL1P22362 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL1P22362 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL1P22362 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL1P22362 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCL1P22362 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL1P22362 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms