Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBCP0CG48 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBCP0CG48 SERBP1P1-201ENST00000396021 1160 ntBASIC18.54■□□□□ 0.56
UBCP0CG48 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.54■□□□□ 0.56
UBCP0CG48 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.54■□□□□ 0.56
UBCP0CG48 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.54■□□□□ 0.56
UBCP0CG48 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.54■□□□□ 0.56
UBCP0CG48 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
UBCP0CG48 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.54■□□□□ 0.56
UBCP0CG48 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.54■□□□□ 0.56
UBCP0CG48 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBCP0CG48 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBCP0CG48 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBCP0CG48 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBCP0CG48 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBCP0CG48 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBCP0CG48 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.53■□□□□ 0.56
UBCP0CG48 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.53■□□□□ 0.56
UBCP0CG48 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBCP0CG48 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
UBCP0CG48 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.53■□□□□ 0.56
UBCP0CG48 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBCP0CG48 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.53■□□□□ 0.56
UBCP0CG48 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.53■□□□□ 0.56
UBCP0CG48 RNF165-205ENST00000588679 2904 ntBASIC18.53■□□□□ 0.56
UBCP0CG48 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBCP0CG48 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.53■□□□□ 0.56
UBCP0CG48 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.53■□□□□ 0.56
UBCP0CG48 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.53■□□□□ 0.56
UBCP0CG48 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.53■□□□□ 0.56
UBCP0CG48 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBCP0CG48 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBCP0CG48 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
UBCP0CG48 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.52■□□□□ 0.56
UBCP0CG48 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBCP0CG48 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBCP0CG48 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBCP0CG48 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.52■□□□□ 0.56
UBCP0CG48 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.52■□□□□ 0.56
UBCP0CG48 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
UBCP0CG48 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBCP0CG48 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBCP0CG48 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBCP0CG48 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
UBCP0CG48 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
UBCP0CG48 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
UBCP0CG48 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.51■□□□□ 0.55
UBCP0CG48 AL356441.2-201ENST00000443009 864 ntBASIC18.51■□□□□ 0.55
UBCP0CG48 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.51■□□□□ 0.55
UBCP0CG48 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
UBCP0CG48 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
UBCP0CG48 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.51■□□□□ 0.55
UBCP0CG48 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
UBCP0CG48 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.51■□□□□ 0.55
UBCP0CG48 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
UBCP0CG48 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.51■□□□□ 0.55
UBCP0CG48 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
UBCP0CG48 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.51■□□□□ 0.55
UBCP0CG48 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.51■□□□□ 0.55
UBCP0CG48 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBCP0CG48 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.5■□□□□ 0.55
UBCP0CG48 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
UBCP0CG48 AC003102.1-202ENST00000563394 1796 ntBASIC18.5■□□□□ 0.55
UBCP0CG48 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.5■□□□□ 0.55
UBCP0CG48 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
UBCP0CG48 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
UBCP0CG48 SLC47A1P1-202ENST00000449666 945 ntBASIC18.5■□□□□ 0.55
UBCP0CG48 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.5■□□□□ 0.55
UBCP0CG48 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.5■□□□□ 0.55
UBCP0CG48 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBCP0CG48 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
UBCP0CG48 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms