Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 YAL065CYAL065C 387 nt2.93□□□□□ -1.94
TY2B-LR1P0C2J3 RPS31YLR167W 459 nt2.93□□□□□ -1.94
TY2B-LR1P0C2J3 MMS1YPR164W 4224 nt2.92□□□□□ -1.94
TY2B-LR1P0C2J3 YER133W-AYER133W-A 342 nt2.92□□□□□ -1.94
TY2B-LR1P0C2J3 BSD2YBR290W 966 nt2.92□□□□□ -1.94
TY2B-LR1P0C2J3 MDV1YJL112W 2145 nt2.92□□□□□ -1.94
TY2B-LR1P0C2J3 STT4YLR305C 5703 nt2.92□□□□□ -1.94
TY2B-LR1P0C2J3 STU1YBL034C 4542 nt2.92□□□□□ -1.94
TY2B-LR1P0C2J3 RPC40YPR110C 1008 nt2.92□□□□□ -1.94
TY2B-LR1P0C2J3 YBR197CYBR197C 654 nt2.92□□□□□ -1.94
TY2B-LR1P0C2J3 YBR139WYBR139W 1527 nt2.91□□□□□ -1.94
TY2B-LR1P0C2J3 COA6YMR244C-A 315 nt2.91□□□□□ -1.94
TY2B-LR1P0C2J3 PEX17YNL214W 600 nt2.91□□□□□ -1.94
TY2B-LR1P0C2J3 SLD7YOR060C 774 nt2.91□□□□□ -1.94
TY2B-LR1P0C2J3 YPR147CYPR147C 915 nt2.91□□□□□ -1.94
TY2B-LR1P0C2J3 JSN1YJR091C 3276 nt2.91□□□□□ -1.94
TY2B-LR1P0C2J3 ALO1YML086C 1581 nt2.91□□□□□ -1.94
TY2B-LR1P0C2J3 LAA1YJL207C 6045 nt2.9□□□□□ -1.94
TY2B-LR1P0C2J3 TPD3YAL016W 1908 nt2.9□□□□□ -1.94
TY2B-LR1P0C2J3 BOS1YLR078C 735 nt2.9□□□□□ -1.94
TY2B-LR1P0C2J3 CAT8YMR280C 4302 nt2.9□□□□□ -1.95
TY2B-LR1P0C2J3 NUF2YOL069W 1356 nt2.9□□□□□ -1.95
TY2B-LR1P0C2J3 YHR073W-AYHR073W-A 177 nt2.89□□□□□ -1.95
TY2B-LR1P0C2J3 YLR326WYLR326W 723 nt2.89□□□□□ -1.95
TY2B-LR1P0C2J3 YNR071CYNR071C 1029 nt2.89□□□□□ -1.95
TY2B-LR1P0C2J3 YDR089WYDR089W 2610 nt2.89□□□□□ -1.95
TY2B-LR1P0C2J3 YCR013CYCR013C 648 nt2.89□□□□□ -1.95
TY2B-LR1P0C2J3 SPS4YOR313C 1017 nt2.89□□□□□ -1.95
TY2B-LR1P0C2J3 TRS130YMR218C 3309 nt2.89□□□□□ -1.95
TY2B-LR1P0C2J3 MDS3YGL197W 4464 nt2.88□□□□□ -1.95
TY2B-LR1P0C2J3 ADI1YMR009W 540 nt2.88□□□□□ -1.95
TY2B-LR1P0C2J3 MSH3YCR092C 3057 nt2.87□□□□□ -1.95
TY2B-LR1P0C2J3 YJL147CYJL147C 1149 nt2.87□□□□□ -1.95
TY2B-LR1P0C2J3 NFI1YOR156C 2181 nt2.87□□□□□ -1.95
TY2B-LR1P0C2J3 CBP1YJL209W 1965 nt2.87□□□□□ -1.95
TY2B-LR1P0C2J3 YEL018C-AYEL018C-A 534 nt2.87□□□□□ -1.95
TY2B-LR1P0C2J3 YOR333CYOR333C 417 nt2.87□□□□□ -1.95
TY2B-LR1P0C2J3 TOF1YNL273W 3717 nt2.86□□□□□ -1.95
TY2B-LR1P0C2J3 YHR177WYHR177W 1362 nt2.86□□□□□ -1.95
TY2B-LR1P0C2J3 SMP1YBR182C 1359 nt2.86□□□□□ -1.95
TY2B-LR1P0C2J3 SAS4YDR181C 1446 nt2.86□□□□□ -1.95
TY2B-LR1P0C2J3 BRR6YGL247W 594 nt2.86□□□□□ -1.95
TY2B-LR1P0C2J3 SAE3YHR079C-A 276 nt2.86□□□□□ -1.95
TY2B-LR1P0C2J3 JID1YPR061C 906 nt2.86□□□□□ -1.95
TY2B-LR1P0C2J3 SRS2YJL092W 3525 nt2.86□□□□□ -1.95
TY2B-LR1P0C2J3 VPH1YOR270C 2523 nt2.85□□□□□ -1.95
TY2B-LR1P0C2J3 YDR131CYDR131C 1671 nt2.85□□□□□ -1.95
TY2B-LR1P0C2J3 MGR3YMR115W 1506 nt2.85□□□□□ -1.95
TY2B-LR1P0C2J3 TIF35YDR429C 825 nt2.85□□□□□ -1.95
TY2B-LR1P0C2J3 SMA1YPL027W 738 nt2.85□□□□□ -1.95
TY2B-LR1P0C2J3 GIS1YDR096W 2685 nt2.85□□□□□ -1.95
TY2B-LR1P0C2J3 YDL162CYDL162C 357 nt2.84□□□□□ -1.95
TY2B-LR1P0C2J3 PET191YJR034W 327 nt2.84□□□□□ -1.95
TY2B-LR1P0C2J3 ELO3YLR372W 1038 nt2.84□□□□□ -1.95
TY2B-LR1P0C2J3 IDI1YPL117C 867 nt2.84□□□□□ -1.95
TY2B-LR1P0C2J3 TRM13YOL125W 1431 nt2.84□□□□□ -1.95
TY2B-LR1P0C2J3 TFC1YBR123C 1950 nt2.84□□□□□ -1.96
TY2B-LR1P0C2J3 REH1YLR387C 1299 nt2.84□□□□□ -1.96
TY2B-LR1P0C2J3 ARF3YOR094W 552 nt2.84□□□□□ -1.96
TY2B-LR1P0C2J3 ALY1YKR021W 2748 nt2.83□□□□□ -1.96
TY2B-LR1P0C2J3 TTI1YKL033W 3117 nt2.83□□□□□ -1.96
TY2B-LR1P0C2J3 YER165C-AYER165C-A 357 nt2.83□□□□□ -1.96
TY2B-LR1P0C2J3 EXO84YBR102C 2262 nt2.83□□□□□ -1.96
TY2B-LR1P0C2J3 SXM1YDR395W 2835 nt2.83□□□□□ -1.96
TY2B-LR1P0C2J3 ESC1YMR219W 4977 nt2.82□□□□□ -1.96
TY2B-LR1P0C2J3 GUK1YDR454C 564 nt2.82□□□□□ -1.96
TY2B-LR1P0C2J3 SOL3YHR163W 750 nt2.82□□□□□ -1.96
TY2B-LR1P0C2J3 YMR030W-AYMR030W-A 291 nt2.82□□□□□ -1.96
TY2B-LR1P0C2J3 YMR310CYMR310C 954 nt2.82□□□□□ -1.96
TY2B-LR1P0C2J3 YKR078WYKR078W 1758 nt2.82□□□□□ -1.96
TY2B-LR1P0C2J3 DOT6YER088C 2013 nt2.82□□□□□ -1.96
TY2B-LR1P0C2J3 GLN4YOR168W 2430 nt2.82□□□□□ -1.96
TY2B-LR1P0C2J3 ADK2YER170W 678 nt2.82□□□□□ -1.96
TY2B-LR1P0C2J3 YIR040CYIR040C 333 nt2.82□□□□□ -1.96
TY2B-LR1P0C2J3 MFM1YPL060W 1242 nt2.82□□□□□ -1.96
TY2B-LR1P0C2J3 CDC55YGL190C 1581 nt2.81□□□□□ -1.96
TY2B-LR1P0C2J3 PSR1YLL010C 1284 nt2.81□□□□□ -1.96
TY2B-LR1P0C2J3 SKI3YPR189W 4299 nt2.8□□□□□ -1.96
TY2B-LR1P0C2J3 YGL132WYGL132W 336 nt2.8□□□□□ -1.96
TY2B-LR1P0C2J3 STH1YIL126W 4080 nt2.8□□□□□ -1.96
TY2B-LR1P0C2J3 SEN54YPL083C 1404 nt2.8□□□□□ -1.96
TY2B-LR1P0C2J3 VAM10YOR068C 345 nt2.79□□□□□ -1.96
TY2B-LR1P0C2J3 MEI5YPL121C 669 nt2.79□□□□□ -1.96
TY2B-LR1P0C2J3 PCL8YPL219W 1479 nt2.79□□□□□ -1.96
TY2B-LR1P0C2J3 YJR039WYJR039W 3366 nt2.79□□□□□ -1.96
TY2B-LR1P0C2J3 PSK1YAL017W 4071 nt2.79□□□□□ -1.96
TY2B-LR1P0C2J3 SAC3YDR159W 3906 nt2.79□□□□□ -1.96
TY2B-LR1P0C2J3 SET1YHR119W 3243 nt2.78□□□□□ -1.96
TY2B-LR1P0C2J3 YLR230WYLR230W 306 nt2.78□□□□□ -1.96
TY2B-LR1P0C2J3 MRM1YOR201C 1239 nt2.78□□□□□ -1.96
TY2B-LR1P0C2J3 ADY4YLR227C 1482 nt2.77□□□□□ -1.97
TY2B-LR1P0C2J3 MIH1YMR036C 1665 nt2.77□□□□□ -1.97
TY2B-LR1P0C2J3 YRB1YDR002W 606 nt2.77□□□□□ -1.97
TY2B-LR1P0C2J3 YMR194C-AYMR194C-A 225 nt2.77□□□□□ -1.97
TY2B-LR1P0C2J3 BCS1YDR375C 1371 nt2.76□□□□□ -1.97
TY2B-LR1P0C2J3 VPS34YLR240W 2628 nt2.76□□□□□ -1.97
TY2B-LR1P0C2J3 YHL006W-AYHL006W-A 354 nt2.76□□□□□ -1.97
TY2B-LR1P0C2J3 YIL024CYIL024C 570 nt2.76□□□□□ -1.97
TY2B-LR1P0C2J3 YBL012CYBL012C 402 nt2.76□□□□□ -1.97
TY2B-LR1P0C2J3 POS5YPL188W 1245 nt2.76□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms