Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC009237.3-201ENST00000393279 1427 ntBASIC22.01■■□□□ 1.11
CD48P09326 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD48P09326 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CD48P09326 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD48P09326 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
CD48P09326 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CD48P09326 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
CD48P09326 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.01■■□□□ 1.11
CD48P09326 AC012414.1-201ENST00000556676 535 ntBASIC22.01■■□□□ 1.11
CD48P09326 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CD48P09326 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD48P09326 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD48P09326 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22■■□□□ 1.11
CD48P09326 AC105265.2-201ENST00000467189 838 ntBASIC22■■□□□ 1.11
CD48P09326 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22■■□□□ 1.11
CD48P09326 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD48P09326 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD48P09326 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD48P09326 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD48P09326 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD48P09326 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD48P09326 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD48P09326 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CD48P09326 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22■■□□□ 1.11
CD48P09326 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
CD48P09326 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.99■■□□□ 1.11
CD48P09326 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD48P09326 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD48P09326 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD48P09326 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.99■■□□□ 1.11
CD48P09326 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD48P09326 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.99■■□□□ 1.11
CD48P09326 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD48P09326 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD48P09326 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD48P09326 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.99■■□□□ 1.11
CD48P09326 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CD48P09326 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD48P09326 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD48P09326 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD48P09326 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.99■■□□□ 1.11
CD48P09326 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CD48P09326 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CD48P09326 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CD48P09326 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CD48P09326 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD48P09326 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD48P09326 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CD48P09326 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CD48P09326 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CD48P09326 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.98■■□□□ 1.11
CD48P09326 MIR6084-201ENST00000622012 110 ntBASIC21.98■■□□□ 1.11
CD48P09326 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CD48P09326 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CD48P09326 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CD48P09326 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.98■■□□□ 1.11
CD48P09326 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD48P09326 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.98■■□□□ 1.11
CD48P09326 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.98■■□□□ 1.11
CD48P09326 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CD48P09326 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CD48P09326 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CD48P09326 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD48P09326 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CD48P09326 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD48P09326 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CD48P09326 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.97■■□□□ 1.11
CD48P09326 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.97■■□□□ 1.11
CD48P09326 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CD48P09326 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.97■■□□□ 1.11
CD48P09326 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.97■■□□□ 1.11
CD48P09326 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.97■■□□□ 1.11
CD48P09326 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.97■■□□□ 1.11
CD48P09326 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CD48P09326 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD48P09326 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD48P09326 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD48P09326 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CD48P09326 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD48P09326 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD48P09326 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.96■■□□□ 1.11
CD48P09326 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.96■■□□□ 1.11
CD48P09326 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.96■■□□□ 1.11
CD48P09326 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.96■■□□□ 1.11
CD48P09326 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.96■■□□□ 1.11
CD48P09326 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD48P09326 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CD48P09326 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CD48P09326 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CD48P09326 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD48P09326 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CD48P09326 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD48P09326 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.96■■□□□ 1.11
CD48P09326 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.96■■□□□ 1.11
CD48P09326 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CD48P09326 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
CD48P09326 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD48P09326 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD48P09326 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.95■■□□□ 1.1
CD48P09326 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms