Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.44■■□□□ 1.02
MMP2P08253 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP2P08253 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MMP2P08253 AC026271.2-201ENST00000428091 497 ntBASIC21.44■■□□□ 1.02
MMP2P08253 EEF1DP3-203ENST00000566025 782 ntBASIC21.44■■□□□ 1.02
MMP2P08253 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.44■■□□□ 1.02
MMP2P08253 MIR6821-201ENST00000617625 74 ntBASIC21.44■■□□□ 1.02
MMP2P08253 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP2P08253 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP2P08253 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MMP2P08253 Z98882.1-201ENST00000622160 2253 ntBASIC21.44■■□□□ 1.02
MMP2P08253 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP2P08253 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP2P08253 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP2P08253 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MMP2P08253 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP2P08253 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP2P08253 AC007375.3-201ENST00000600936 2314 ntBASIC21.43■■□□□ 1.02
MMP2P08253 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP2P08253 DUX4L2-201ENST00000561772 1275 ntBASIC21.43■■□□□ 1.02
MMP2P08253 AC087623.3-201ENST00000607047 1098 ntBASIC21.43■■□□□ 1.02
MMP2P08253 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.43■■□□□ 1.02
MMP2P08253 DUX4L6-201ENST00000626483 1275 ntBASIC21.43■■□□□ 1.02
MMP2P08253 DUX4L1-201ENST00000627662 1275 ntBASIC21.43■■□□□ 1.02
MMP2P08253 DUX4L8-201ENST00000629013 1275 ntBASIC21.43■■□□□ 1.02
MMP2P08253 DUX4L3-201ENST00000630187 1275 ntBASIC21.43■■□□□ 1.02
MMP2P08253 DUX4L7-201ENST00000630678 1275 ntBASIC21.43■■□□□ 1.02
MMP2P08253 DUX4L5-201ENST00000630834 1275 ntBASIC21.43■■□□□ 1.02
MMP2P08253 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.43■■□□□ 1.02
MMP2P08253 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP2P08253 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP2P08253 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
MMP2P08253 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
MMP2P08253 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MMP2P08253 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP2P08253 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP2P08253 AC026310.3-201ENST00000625186 2373 ntBASIC21.43■■□□□ 1.02
MMP2P08253 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MMP2P08253 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MMP2P08253 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MMP2P08253 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MMP2P08253 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MMP2P08253 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MMP2P08253 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MMP2P08253 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MMP2P08253 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.41■■□□□ 1.02
MMP2P08253 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
MMP2P08253 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MMP2P08253 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
MMP2P08253 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP2P08253 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP2P08253 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
MMP2P08253 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
MMP2P08253 KRT87P-202ENST00000534226 1464 ntBASIC21.41■■□□□ 1.02
MMP2P08253 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MMP2P08253 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP2P08253 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MMP2P08253 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP2P08253 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.41■■□□□ 1.02
MMP2P08253 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.41■■□□□ 1.02
MMP2P08253 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.41■■□□□ 1.02
MMP2P08253 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.41■■□□□ 1.02
MMP2P08253 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MMP2P08253 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.41■■□□□ 1.02
MMP2P08253 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.41■■□□□ 1.02
MMP2P08253 KRT18P61-201ENST00000585825 1298 ntBASIC21.41■■□□□ 1.02
MMP2P08253 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
MMP2P08253 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MMP2P08253 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP2P08253 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MMP2P08253 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP2P08253 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MMP2P08253 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.4■■□□□ 1.02
MMP2P08253 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MMP2P08253 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.4■■□□□ 1.02
MMP2P08253 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MMP2P08253 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
MMP2P08253 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.4■■□□□ 1.02
MMP2P08253 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.4■■□□□ 1.02
MMP2P08253 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.4■■□□□ 1.02
MMP2P08253 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MMP2P08253 RARRES2P6-201ENST00000567333 442 ntBASIC21.4■■□□□ 1.02
MMP2P08253 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.4■■□□□ 1.02
MMP2P08253 AC053503.5-201ENST00000601508 636 ntBASIC21.4■■□□□ 1.02
MMP2P08253 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.4■■□□□ 1.02
MMP2P08253 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.4■■□□□ 1.02
MMP2P08253 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MMP2P08253 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MMP2P08253 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MMP2P08253 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
MMP2P08253 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.39■■□□□ 1.02
MMP2P08253 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
MMP2P08253 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MMP2P08253 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MMP2P08253 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MMP2P08253 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MMP2P08253 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.39■■□□□ 1.01
MMP2P08253 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.39■■□□□ 1.01
MMP2P08253 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.39■■□□□ 1.01
MMP2P08253 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms