Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.59■□□□□ 0.41
CTSDP07339 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.59■□□□□ 0.41
CTSDP07339 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTSDP07339 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CTSDP07339 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CTSDP07339 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTSDP07339 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTSDP07339 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTSDP07339 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTSDP07339 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CTSDP07339 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.58■□□□□ 0.4
CTSDP07339 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTSDP07339 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.58■□□□□ 0.4
CTSDP07339 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.58■□□□□ 0.4
CTSDP07339 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.58■□□□□ 0.4
CTSDP07339 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTSDP07339 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.58■□□□□ 0.4
CTSDP07339 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTSDP07339 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.58■□□□□ 0.4
CTSDP07339 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTSDP07339 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTSDP07339 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTSDP07339 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CTSDP07339 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CTSDP07339 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.57■□□□□ 0.4
CTSDP07339 AC133637.1-201ENST00000624115 1537 ntBASIC17.57■□□□□ 0.4
CTSDP07339 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CTSDP07339 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CTSDP07339 AL451085.2-201ENST00000605085 799 ntBASIC17.57■□□□□ 0.4
CTSDP07339 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSDP07339 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
CTSDP07339 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
CTSDP07339 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.57■□□□□ 0.4
CTSDP07339 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.57■□□□□ 0.4
CTSDP07339 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CTSDP07339 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.56■□□□□ 0.4
CTSDP07339 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSDP07339 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSDP07339 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSDP07339 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSDP07339 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CTSDP07339 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.56■□□□□ 0.4
CTSDP07339 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
CTSDP07339 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSDP07339 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CTSDP07339 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.56■□□□□ 0.4
CTSDP07339 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSDP07339 AC241377.3-202ENST00000626088 1088 ntBASIC17.56■□□□□ 0.4
CTSDP07339 AC241585.3-202ENST00000628937 1088 ntBASIC17.56■□□□□ 0.4
CTSDP07339 AC245100.8-202ENST00000629247 1058 ntBASIC17.56■□□□□ 0.4
CTSDP07339 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CTSDP07339 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSDP07339 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSDP07339 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.56■□□□□ 0.4
CTSDP07339 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSDP07339 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTSDP07339 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.56■□□□□ 0.4
CTSDP07339 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CTSDP07339 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.55■□□□□ 0.4
CTSDP07339 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CTSDP07339 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.55■□□□□ 0.4
CTSDP07339 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CTSDP07339 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.55■□□□□ 0.4
CTSDP07339 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 Z92544.1-202ENST00000571933 1220 ntBASIC17.55■□□□□ 0.4
CTSDP07339 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.55■□□□□ 0.4
CTSDP07339 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CTSDP07339 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSDP07339 AP005212.1-201ENST00000581547 1997 ntBASIC17.55■□□□□ 0.4
CTSDP07339 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CTSDP07339 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms