Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.02■■□□□ 1.6
COL2A1P02458 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25.02■■□□□ 1.6
COL2A1P02458 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL2A1P02458 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL2A1P02458 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL2A1P02458 AC061975.6-201ENST00000579045 1553 ntBASIC25.02■■□□□ 1.6
COL2A1P02458 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.02■■□□□ 1.6
COL2A1P02458 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL2A1P02458 MIPEPP3-201ENST00000412105 444 ntBASIC25.02■■□□□ 1.6
COL2A1P02458 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.02■■□□□ 1.6
COL2A1P02458 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.02■■□□□ 1.6
COL2A1P02458 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.02■■□□□ 1.6
COL2A1P02458 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.01■■□□□ 1.59
COL2A1P02458 AC092053.2-201ENST00000640557 1818 ntBASIC25.01■■□□□ 1.59
COL2A1P02458 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.01■■□□□ 1.59
COL2A1P02458 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.01■■□□□ 1.59
COL2A1P02458 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.01■■□□□ 1.59
COL2A1P02458 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL2A1P02458 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL2A1P02458 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC25.01■■□□□ 1.59
COL2A1P02458 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.01■■□□□ 1.59
COL2A1P02458 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC25.01■■□□□ 1.59
COL2A1P02458 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
COL2A1P02458 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC25.01■■□□□ 1.59
COL2A1P02458 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL2A1P02458 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL2A1P02458 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25■■□□□ 1.59
COL2A1P02458 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL2A1P02458 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25■■□□□ 1.59
COL2A1P02458 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL2A1P02458 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25■■□□□ 1.59
COL2A1P02458 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25■■□□□ 1.59
COL2A1P02458 MIR4651-201ENST00000582622 73 ntBASIC25■■□□□ 1.59
COL2A1P02458 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25■■□□□ 1.59
COL2A1P02458 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25■■□□□ 1.59
COL2A1P02458 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL2A1P02458 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
COL2A1P02458 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.99■■□□□ 1.59
COL2A1P02458 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL2A1P02458 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
COL2A1P02458 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL2A1P02458 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL2A1P02458 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL2A1P02458 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.99■■□□□ 1.59
COL2A1P02458 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.99■■□□□ 1.59
COL2A1P02458 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
COL2A1P02458 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.99■■□□□ 1.59
COL2A1P02458 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL2A1P02458 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL2A1P02458 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL2A1P02458 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
COL2A1P02458 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
COL2A1P02458 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
COL2A1P02458 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
COL2A1P02458 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.98■■□□□ 1.59
COL2A1P02458 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.98■■□□□ 1.59
COL2A1P02458 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.98■■□□□ 1.59
COL2A1P02458 AC008694.1-202ENST00000636953 945 ntBASIC24.98■■□□□ 1.59
COL2A1P02458 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.98■■□□□ 1.59
COL2A1P02458 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.98■■□□□ 1.59
COL2A1P02458 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL2A1P02458 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
COL2A1P02458 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL2A1P02458 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL2A1P02458 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
COL2A1P02458 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.97■■□□□ 1.59
COL2A1P02458 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
COL2A1P02458 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.97■■□□□ 1.59
COL2A1P02458 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL2A1P02458 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL2A1P02458 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.96■■□□□ 1.59
COL2A1P02458 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL2A1P02458 AL591742.1-201ENST00000604433 565 ntBASIC24.96■■□□□ 1.59
COL2A1P02458 MYC-209ENST00000641252 345 ntBASIC24.96■■□□□ 1.59
COL2A1P02458 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL2A1P02458 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL2A1P02458 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL2A1P02458 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.96■■□□□ 1.59
COL2A1P02458 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.96■■□□□ 1.59
COL2A1P02458 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL2A1P02458 TSPY20P-201ENST00000450910 630 ntBASIC24.96■■□□□ 1.59
COL2A1P02458 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.96■■□□□ 1.59
COL2A1P02458 AC066615.1-201ENST00000640911 628 ntBASIC24.96■■□□□ 1.59
COL2A1P02458 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.95■■□□□ 1.59
COL2A1P02458 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
COL2A1P02458 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
COL2A1P02458 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL2A1P02458 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL2A1P02458 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.95■■□□□ 1.58
COL2A1P02458 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL2A1P02458 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL2A1P02458 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC24.95■■□□□ 1.58
COL2A1P02458 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL2A1P02458 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.95■■□□□ 1.58
COL2A1P02458 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.95■■□□□ 1.58
COL2A1P02458 RARRES2P4-201ENST00000514074 484 ntBASIC24.95■■□□□ 1.58
COL2A1P02458 TMEM191A-211ENST00000637163 1067 ntBASIC24.95■■□□□ 1.58
COL2A1P02458 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
COL2A1P02458 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL2A1P02458 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms