Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC32.3■■■□□ 2.76
RAPGEF3O95398 BX088651.1-201ENST00000540551 451 ntBASIC32.3■■■□□ 2.76
RAPGEF3O95398 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
RAPGEF3O95398 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC32.3■■■□□ 2.76
RAPGEF3O95398 AL139125.2-201ENST00000623134 1869 ntBASIC32.3■■■□□ 2.76
RAPGEF3O95398 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RAPGEF3O95398 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RAPGEF3O95398 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
RAPGEF3O95398 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
RAPGEF3O95398 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC32.29■■■□□ 2.76
RAPGEF3O95398 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
RAPGEF3O95398 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC32.29■■■□□ 2.76
RAPGEF3O95398 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
RAPGEF3O95398 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
RAPGEF3O95398 AL355472.2-201ENST00000422958 438 ntBASIC32.29■■■□□ 2.76
RAPGEF3O95398 NME6-213ENST00000451657 871 ntTSL 2 BASIC32.29■■■□□ 2.76
RAPGEF3O95398 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
RAPGEF3O95398 AC142381.3-201ENST00000568208 1670 ntBASIC32.29■■■□□ 2.76
RAPGEF3O95398 AC004812.2-201ENST00000611079 2094 ntBASIC32.29■■■□□ 2.76
RAPGEF3O95398 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC32.29■■■□□ 2.76
RAPGEF3O95398 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC32.28■■■□□ 2.76
RAPGEF3O95398 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
RAPGEF3O95398 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
RAPGEF3O95398 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
RAPGEF3O95398 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC32.28■■■□□ 2.76
RAPGEF3O95398 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC32.28■■■□□ 2.76
RAPGEF3O95398 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC32.28■■■□□ 2.76
RAPGEF3O95398 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC32.28■■■□□ 2.76
RAPGEF3O95398 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC32.28■■■□□ 2.76
RAPGEF3O95398 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC32.28■■■□□ 2.76
RAPGEF3O95398 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC32.28■■■□□ 2.76
RAPGEF3O95398 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC32.28■■■□□ 2.76
RAPGEF3O95398 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC32.27■■■□□ 2.76
RAPGEF3O95398 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC32.27■■■□□ 2.76
RAPGEF3O95398 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
RAPGEF3O95398 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
RAPGEF3O95398 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC32.27■■■□□ 2.76
RAPGEF3O95398 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
RAPGEF3O95398 AC120498.10-201ENST00000621827 505 ntBASIC32.27■■■□□ 2.76
RAPGEF3O95398 HLA-B-256ENST00000639848 1089 ntBASIC32.27■■■□□ 2.76
RAPGEF3O95398 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
RAPGEF3O95398 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC32.27■■■□□ 2.76
RAPGEF3O95398 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
RAPGEF3O95398 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
RAPGEF3O95398 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
RAPGEF3O95398 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
RAPGEF3O95398 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC32.26■■■□□ 2.75
RAPGEF3O95398 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC32.25■■■□□ 2.75
RAPGEF3O95398 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
RAPGEF3O95398 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC32.25■■■□□ 2.75
RAPGEF3O95398 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
RAPGEF3O95398 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC32.25■■■□□ 2.75
RAPGEF3O95398 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RAPGEF3O95398 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
RAPGEF3O95398 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
RAPGEF3O95398 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RAPGEF3O95398 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
RAPGEF3O95398 MDFI-202ENST00000373050 809 ntTSL 2 BASIC32.24■■■□□ 2.75
RAPGEF3O95398 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC32.24■■■□□ 2.75
RAPGEF3O95398 PBX1-209ENST00000485769 834 ntTSL 2 BASIC32.24■■■□□ 2.75
RAPGEF3O95398 AC008175.2-201ENST00000612840 297 ntBASIC32.24■■■□□ 2.75
RAPGEF3O95398 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC32.24■■■□□ 2.75
RAPGEF3O95398 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
RAPGEF3O95398 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC32.24■■■□□ 2.75
RAPGEF3O95398 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
RAPGEF3O95398 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
RAPGEF3O95398 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC32.24■■■□□ 2.75
RAPGEF3O95398 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
RAPGEF3O95398 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
RAPGEF3O95398 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC32.23■■■□□ 2.75
RAPGEF3O95398 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
RAPGEF3O95398 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RAPGEF3O95398 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
RAPGEF3O95398 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC32.23■■■□□ 2.75
RAPGEF3O95398 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RAPGEF3O95398 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC32.22■■■□□ 2.75
RAPGEF3O95398 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
RAPGEF3O95398 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC32.22■■■□□ 2.75
RAPGEF3O95398 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RAPGEF3O95398 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC32.22■■■□□ 2.75
RAPGEF3O95398 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
RAPGEF3O95398 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RAPGEF3O95398 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RAPGEF3O95398 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC32.21■■■□□ 2.75
RAPGEF3O95398 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
RAPGEF3O95398 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
RAPGEF3O95398 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC32.21■■■□□ 2.75
RAPGEF3O95398 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC32.21■■■□□ 2.75
RAPGEF3O95398 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC32.21■■■□□ 2.75
RAPGEF3O95398 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
RAPGEF3O95398 LINC00526-201ENST00000581067 1875 ntBASIC32.2■■■□□ 2.75
RAPGEF3O95398 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
RAPGEF3O95398 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
RAPGEF3O95398 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
RAPGEF3O95398 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
RAPGEF3O95398 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC32.2■■■□□ 2.75
RAPGEF3O95398 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC32.2■■■□□ 2.75
RAPGEF3O95398 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
RAPGEF3O95398 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
RAPGEF3O95398 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC32.2■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms