Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.99■□□□□ 0.63
UPK3AO75631 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK3AO75631 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
UPK3AO75631 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.99■□□□□ 0.63
UPK3AO75631 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.99■□□□□ 0.63
UPK3AO75631 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK3AO75631 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.98■□□□□ 0.63
UPK3AO75631 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK3AO75631 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK3AO75631 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK3AO75631 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK3AO75631 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK3AO75631 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK3AO75631 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK3AO75631 AL034346.1-201ENST00000568244 1277 ntBASIC18.98■□□□□ 0.63
UPK3AO75631 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.98■□□□□ 0.63
UPK3AO75631 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.98■□□□□ 0.63
UPK3AO75631 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK3AO75631 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UPK3AO75631 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.98■□□□□ 0.63
UPK3AO75631 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK3AO75631 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK3AO75631 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK3AO75631 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.97■□□□□ 0.63
UPK3AO75631 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
UPK3AO75631 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPK3AO75631 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPK3AO75631 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPK3AO75631 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPK3AO75631 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK3AO75631 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPK3AO75631 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK3AO75631 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK3AO75631 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK3AO75631 AC027612.3-201ENST00000413684 1047 ntBASIC18.96■□□□□ 0.63
UPK3AO75631 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.96■□□□□ 0.63
UPK3AO75631 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK3AO75631 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
UPK3AO75631 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK3AO75631 AC026471.6-201ENST00000622954 1905 ntBASIC18.96■□□□□ 0.63
UPK3AO75631 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.95■□□□□ 0.62
UPK3AO75631 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
UPK3AO75631 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK3AO75631 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK3AO75631 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPK3AO75631 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK3AO75631 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.95■□□□□ 0.62
UPK3AO75631 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK3AO75631 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
UPK3AO75631 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.95■□□□□ 0.62
UPK3AO75631 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPK3AO75631 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK3AO75631 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.95■□□□□ 0.62
UPK3AO75631 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.95■□□□□ 0.62
UPK3AO75631 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
UPK3AO75631 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK3AO75631 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK3AO75631 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.94■□□□□ 0.62
UPK3AO75631 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK3AO75631 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK3AO75631 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPK3AO75631 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
UPK3AO75631 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.94■□□□□ 0.62
UPK3AO75631 FEM1AP4-201ENST00000443167 1987 ntBASIC18.94■□□□□ 0.62
UPK3AO75631 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPK3AO75631 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK3AO75631 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
UPK3AO75631 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.94■□□□□ 0.62
UPK3AO75631 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.94■□□□□ 0.62
UPK3AO75631 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.94■□□□□ 0.62
UPK3AO75631 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.94■□□□□ 0.62
UPK3AO75631 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK3AO75631 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.94■□□□□ 0.62
UPK3AO75631 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK3AO75631 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.94■□□□□ 0.62
UPK3AO75631 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.93■□□□□ 0.62
UPK3AO75631 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPK3AO75631 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.93■□□□□ 0.62
UPK3AO75631 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.93■□□□□ 0.62
UPK3AO75631 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK3AO75631 AC009237.3-201ENST00000393279 1427 ntBASIC18.93■□□□□ 0.62
UPK3AO75631 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
UPK3AO75631 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.93■□□□□ 0.62
UPK3AO75631 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPK3AO75631 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
UPK3AO75631 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.93■□□□□ 0.62
UPK3AO75631 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UPK3AO75631 TPRG1LP1-201ENST00000598702 760 ntBASIC18.93■□□□□ 0.62
UPK3AO75631 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK3AO75631 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.93■□□□□ 0.62
UPK3AO75631 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.93■□□□□ 0.62
UPK3AO75631 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.93■□□□□ 0.62
UPK3AO75631 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.93■□□□□ 0.62
UPK3AO75631 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK3AO75631 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.92■□□□□ 0.62
UPK3AO75631 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPK3AO75631 AC005224.4-201ENST00000583262 1652 ntBASIC18.92■□□□□ 0.62
UPK3AO75631 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPK3AO75631 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPK3AO75631 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms