Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.17■□□□□ 0.98
GPC4O75487 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.17■□□□□ 0.98
GPC4O75487 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GPC4O75487 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC4O75487 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GPC4O75487 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GPC4O75487 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC4O75487 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.17■□□□□ 0.98
GPC4O75487 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC4O75487 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
GPC4O75487 AL024507.2-201ENST00000606070 2574 ntBASIC21.16■□□□□ 0.98
GPC4O75487 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPC4O75487 AC010542.4-201ENST00000563151 1910 ntBASIC21.16■□□□□ 0.98
GPC4O75487 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GPC4O75487 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.16■□□□□ 0.98
GPC4O75487 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GPC4O75487 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GPC4O75487 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPC4O75487 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
GPC4O75487 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPC4O75487 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GPC4O75487 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.16■□□□□ 0.98
GPC4O75487 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.16■□□□□ 0.98
GPC4O75487 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.16■□□□□ 0.98
GPC4O75487 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.16■□□□□ 0.98
GPC4O75487 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPC4O75487 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GPC4O75487 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.16■□□□□ 0.98
GPC4O75487 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPC4O75487 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.15■□□□□ 0.98
GPC4O75487 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
GPC4O75487 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GPC4O75487 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
GPC4O75487 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPC4O75487 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPC4O75487 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPC4O75487 AC105233.4-201ENST00000642045 216 ntBASIC21.15■□□□□ 0.98
GPC4O75487 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPC4O75487 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GPC4O75487 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPC4O75487 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPC4O75487 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPC4O75487 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.15■□□□□ 0.98
GPC4O75487 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPC4O75487 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPC4O75487 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
GPC4O75487 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.14■□□□□ 0.98
GPC4O75487 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
GPC4O75487 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GPC4O75487 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GPC4O75487 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GPC4O75487 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GPC4O75487 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GPC4O75487 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GPC4O75487 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
GPC4O75487 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.14■□□□□ 0.97
GPC4O75487 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
GPC4O75487 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.14■□□□□ 0.97
GPC4O75487 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.14■□□□□ 0.97
GPC4O75487 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
GPC4O75487 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GPC4O75487 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.14■□□□□ 0.97
GPC4O75487 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.97
GPC4O75487 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
GPC4O75487 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPC4O75487 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPC4O75487 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPC4O75487 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GPC4O75487 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPC4O75487 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPC4O75487 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GPC4O75487 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.13■□□□□ 0.97
GPC4O75487 IRS3P-201ENST00000223076 1006 ntBASIC21.13■□□□□ 0.97
GPC4O75487 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPC4O75487 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
GPC4O75487 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPC4O75487 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPC4O75487 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
GPC4O75487 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
GPC4O75487 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
GPC4O75487 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
GPC4O75487 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPC4O75487 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPC4O75487 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPC4O75487 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.12■□□□□ 0.97
GPC4O75487 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GPC4O75487 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GPC4O75487 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GPC4O75487 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
GPC4O75487 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.12■□□□□ 0.97
GPC4O75487 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.12■□□□□ 0.97
GPC4O75487 AC012414.1-201ENST00000556676 535 ntBASIC21.12■□□□□ 0.97
GPC4O75487 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
GPC4O75487 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GPC4O75487 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GPC4O75487 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.12■□□□□ 0.97
GPC4O75487 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.12■□□□□ 0.97
GPC4O75487 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GPC4O75487 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.12■□□□□ 0.97
GPC4O75487 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms