Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM3O75382 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM3O75382 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM3O75382 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM3O75382 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM3O75382 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM3O75382 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRIM3O75382 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM3O75382 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TRIM3O75382 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM3O75382 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
TRIM3O75382 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM3O75382 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM3O75382 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM3O75382 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM3O75382 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM3O75382 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM3O75382 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM3O75382 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM3O75382 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM3O75382 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
TRIM3O75382 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM3O75382 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM3O75382 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM3O75382 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM3O75382 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM3O75382 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM3O75382 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM3O75382 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM3O75382 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM3O75382 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM3O75382 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM3O75382 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.68■□□□□ 0.74
TRIM3O75382 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM3O75382 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM3O75382 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM3O75382 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM3O75382 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM3O75382 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM3O75382 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM3O75382 OR7E47P-201ENST00000546390 1422 ntBASIC19.68■□□□□ 0.74
TRIM3O75382 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM3O75382 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM3O75382 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM3O75382 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM3O75382 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM3O75382 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.67■□□□□ 0.74
TRIM3O75382 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRIM3O75382 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM3O75382 KRT18P5-201ENST00000436075 1291 ntBASIC19.67■□□□□ 0.74
TRIM3O75382 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM3O75382 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.67■□□□□ 0.74
TRIM3O75382 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRIM3O75382 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM3O75382 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM3O75382 AC104564.3-201ENST00000582367 638 ntBASIC19.67■□□□□ 0.74
TRIM3O75382 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM3O75382 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM3O75382 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM3O75382 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM3O75382 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM3O75382 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM3O75382 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM3O75382 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRIM3O75382 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM3O75382 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM3O75382 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM3O75382 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM3O75382 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM3O75382 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM3O75382 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM3O75382 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM3O75382 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.66■□□□□ 0.74
TRIM3O75382 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM3O75382 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRIM3O75382 AC009237.3-201ENST00000393279 1427 ntBASIC19.66■□□□□ 0.74
TRIM3O75382 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM3O75382 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM3O75382 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM3O75382 AC092053.2-201ENST00000640557 1818 ntBASIC19.65■□□□□ 0.74
TRIM3O75382 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM3O75382 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.65■□□□□ 0.74
TRIM3O75382 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM3O75382 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM3O75382 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM3O75382 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM3O75382 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM3O75382 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM3O75382 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM3O75382 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM3O75382 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
TRIM3O75382 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM3O75382 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM3O75382 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM3O75382 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM3O75382 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM3O75382 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM3O75382 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM3O75382 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM3O75382 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms