Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
PTCD1O75127 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PTCD1O75127 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
PTCD1O75127 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC27.37■■□□□ 1.97
PTCD1O75127 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC27.37■■□□□ 1.97
PTCD1O75127 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
PTCD1O75127 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PTCD1O75127 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PTCD1O75127 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC27.37■■□□□ 1.97
PTCD1O75127 PRORSD1P-201ENST00000295112 541 ntBASIC27.36■■□□□ 1.97
PTCD1O75127 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC27.36■■□□□ 1.97
PTCD1O75127 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC27.36■■□□□ 1.97
PTCD1O75127 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27.36■■□□□ 1.97
PTCD1O75127 AC083880.1-201ENST00000608266 535 ntBASIC27.36■■□□□ 1.97
PTCD1O75127 AC139530.1-201ENST00000575312 1977 ntBASIC27.36■■□□□ 1.97
PTCD1O75127 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PTCD1O75127 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PTCD1O75127 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PTCD1O75127 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PTCD1O75127 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC27.35■■□□□ 1.97
PTCD1O75127 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PTCD1O75127 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PTCD1O75127 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PTCD1O75127 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PTCD1O75127 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PTCD1O75127 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
PTCD1O75127 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
PTCD1O75127 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PTCD1O75127 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
PTCD1O75127 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PTCD1O75127 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC27.35■■□□□ 1.97
PTCD1O75127 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PTCD1O75127 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC27.35■■□□□ 1.97
PTCD1O75127 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC27.35■■□□□ 1.97
PTCD1O75127 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
PTCD1O75127 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.35■■□□□ 1.97
PTCD1O75127 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
PTCD1O75127 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PTCD1O75127 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PTCD1O75127 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
PTCD1O75127 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
PTCD1O75127 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PTCD1O75127 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PTCD1O75127 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC27.34■■□□□ 1.97
PTCD1O75127 POU5F1P4-201ENST00000413175 1085 ntBASIC27.34■■□□□ 1.97
PTCD1O75127 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PTCD1O75127 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PTCD1O75127 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PTCD1O75127 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.33■■□□□ 1.97
PTCD1O75127 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
PTCD1O75127 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
PTCD1O75127 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC27.33■■□□□ 1.97
PTCD1O75127 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC27.33■■□□□ 1.97
PTCD1O75127 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
PTCD1O75127 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PTCD1O75127 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
PTCD1O75127 RBM17P2-201ENST00000616397 1405 ntBASIC27.33■■□□□ 1.96
PTCD1O75127 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PTCD1O75127 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC27.32■■□□□ 1.96
PTCD1O75127 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PTCD1O75127 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PTCD1O75127 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
PTCD1O75127 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
PTCD1O75127 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC27.32■■□□□ 1.96
PTCD1O75127 RARRES2P4-201ENST00000514074 484 ntBASIC27.32■■□□□ 1.96
PTCD1O75127 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC27.32■■□□□ 1.96
PTCD1O75127 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PTCD1O75127 LTK-203ENST00000453182 2412 ntTSL 2 BASIC27.32■■□□□ 1.96
PTCD1O75127 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC27.32■■□□□ 1.96
PTCD1O75127 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC27.32■■□□□ 1.96
PTCD1O75127 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
PTCD1O75127 AC061975.6-201ENST00000579045 1553 ntBASIC27.31■■□□□ 1.96
PTCD1O75127 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PTCD1O75127 RARG-204ENST00000543726 1779 ntTSL 2 BASIC27.31■■□□□ 1.96
PTCD1O75127 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PTCD1O75127 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC27.31■■□□□ 1.96
PTCD1O75127 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PTCD1O75127 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
PTCD1O75127 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PTCD1O75127 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC27.31■■□□□ 1.96
PTCD1O75127 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PTCD1O75127 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PTCD1O75127 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
PTCD1O75127 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PTCD1O75127 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PTCD1O75127 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PTCD1O75127 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC27.3■■□□□ 1.96
PTCD1O75127 BET1L-207ENST00000529614 560 ntTSL 5 BASIC27.3■■□□□ 1.96
PTCD1O75127 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PTCD1O75127 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PTCD1O75127 AL591742.1-201ENST00000604433 565 ntBASIC27.3■■□□□ 1.96
PTCD1O75127 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC27.3■■□□□ 1.96
PTCD1O75127 MYC-209ENST00000641252 345 ntBASIC27.3■■□□□ 1.96
PTCD1O75127 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PTCD1O75127 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PTCD1O75127 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC27.3■■□□□ 1.96
PTCD1O75127 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC27.3■■□□□ 1.96
PTCD1O75127 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PTCD1O75127 NFE2L3P1-201ENST00000588207 1959 ntBASIC27.29■■□□□ 1.96
PTCD1O75127 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms