Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.12■□□□□ 0.33
CUBNO60494 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CUBNO60494 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CUBNO60494 LINC01960-201ENST00000563759 1884 ntBASIC17.12■□□□□ 0.33
CUBNO60494 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CUBNO60494 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.11■□□□□ 0.33
CUBNO60494 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CUBNO60494 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUBNO60494 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
CUBNO60494 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUBNO60494 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.11■□□□□ 0.33
CUBNO60494 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CUBNO60494 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUBNO60494 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.11■□□□□ 0.33
CUBNO60494 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CUBNO60494 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUBNO60494 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CUBNO60494 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUBNO60494 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUBNO60494 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUBNO60494 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUBNO60494 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUBNO60494 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CUBNO60494 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.1■□□□□ 0.33
CUBNO60494 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CUBNO60494 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.1■□□□□ 0.33
CUBNO60494 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.1■□□□□ 0.33
CUBNO60494 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.1■□□□□ 0.33
CUBNO60494 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.1■□□□□ 0.33
CUBNO60494 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CUBNO60494 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CUBNO60494 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUBNO60494 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.1■□□□□ 0.33
CUBNO60494 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUBNO60494 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUBNO60494 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.1■□□□□ 0.33
CUBNO60494 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUBNO60494 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUBNO60494 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.1■□□□□ 0.33
CUBNO60494 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CUBNO60494 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CUBNO60494 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CUBNO60494 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.1■□□□□ 0.33
CUBNO60494 KRT17P1-201ENST00000399211 1546 ntBASIC17.1■□□□□ 0.33
CUBNO60494 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CUBNO60494 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUBNO60494 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUBNO60494 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CUBNO60494 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUBNO60494 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.09■□□□□ 0.33
CUBNO60494 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.09■□□□□ 0.33
CUBNO60494 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.09■□□□□ 0.33
CUBNO60494 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.09■□□□□ 0.33
CUBNO60494 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.09■□□□□ 0.33
CUBNO60494 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUBNO60494 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CUBNO60494 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUBNO60494 AP004607.7-201ENST00000527152 1677 ntBASIC17.09■□□□□ 0.33
CUBNO60494 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUBNO60494 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.09■□□□□ 0.33
CUBNO60494 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.09■□□□□ 0.33
CUBNO60494 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.09■□□□□ 0.33
CUBNO60494 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUBNO60494 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CUBNO60494 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.09■□□□□ 0.33
CUBNO60494 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CUBNO60494 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CUBNO60494 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CUBNO60494 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.09■□□□□ 0.33
CUBNO60494 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CUBNO60494 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.08■□□□□ 0.33
CUBNO60494 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.08■□□□□ 0.33
CUBNO60494 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CUBNO60494 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.08■□□□□ 0.33
CUBNO60494 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CUBNO60494 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.08■□□□□ 0.33
CUBNO60494 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.08■□□□□ 0.33
CUBNO60494 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CUBNO60494 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CUBNO60494 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CUBNO60494 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.08■□□□□ 0.32
CUBNO60494 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CUBNO60494 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.08■□□□□ 0.32
CUBNO60494 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.08■□□□□ 0.32
CUBNO60494 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CUBNO60494 AL139125.2-201ENST00000623134 1869 ntBASIC17.08■□□□□ 0.32
CUBNO60494 MIR718-201ENST00000390190 70 ntBASIC17.08■□□□□ 0.32
CUBNO60494 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CUBNO60494 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.08■□□□□ 0.32
CUBNO60494 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.08■□□□□ 0.32
CUBNO60494 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUBNO60494 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUBNO60494 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUBNO60494 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CUBNO60494 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.07■□□□□ 0.32
CUBNO60494 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUBNO60494 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.07■□□□□ 0.32
CUBNO60494 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.07■□□□□ 0.32
CUBNO60494 FAM197Y4-202ENST00000622692 608 ntBASIC17.07■□□□□ 0.32
CUBNO60494 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms