Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
URB1O60287 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
URB1O60287 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
URB1O60287 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.05■□□□□ 0.8
URB1O60287 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
URB1O60287 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
URB1O60287 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
URB1O60287 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
URB1O60287 AL162412.1-201ENST00000567129 965 ntBASIC20.05■□□□□ 0.8
URB1O60287 LINC00543-201ENST00000567234 1845 ntBASIC20.05■□□□□ 0.8
URB1O60287 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.05■□□□□ 0.8
URB1O60287 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
URB1O60287 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.05■□□□□ 0.8
URB1O60287 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.04■□□□□ 0.8
URB1O60287 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.04■□□□□ 0.8
URB1O60287 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
URB1O60287 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
URB1O60287 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.04■□□□□ 0.8
URB1O60287 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.04■□□□□ 0.8
URB1O60287 Z99916.2-201ENST00000604037 246 ntBASIC20.04■□□□□ 0.8
URB1O60287 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.03■□□□□ 0.8
URB1O60287 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.03■□□□□ 0.8
URB1O60287 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
URB1O60287 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
URB1O60287 AL353803.4-201ENST00000565882 1934 ntBASIC20.03■□□□□ 0.8
URB1O60287 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
URB1O60287 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
URB1O60287 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
URB1O60287 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
URB1O60287 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
URB1O60287 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
URB1O60287 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.03■□□□□ 0.8
URB1O60287 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
URB1O60287 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
URB1O60287 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
URB1O60287 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
URB1O60287 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
URB1O60287 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
URB1O60287 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
URB1O60287 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
URB1O60287 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.02■□□□□ 0.8
URB1O60287 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
URB1O60287 AC010980.2-201ENST00000587099 1412 ntBASIC20.02■□□□□ 0.8
URB1O60287 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
URB1O60287 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.02■□□□□ 0.8
URB1O60287 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
URB1O60287 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.02■□□□□ 0.8
URB1O60287 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
URB1O60287 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.02■□□□□ 0.8
URB1O60287 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
URB1O60287 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.02■□□□□ 0.8
URB1O60287 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
URB1O60287 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.01■□□□□ 0.79
URB1O60287 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
URB1O60287 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
URB1O60287 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
URB1O60287 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.01■□□□□ 0.79
URB1O60287 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
URB1O60287 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
URB1O60287 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
URB1O60287 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
URB1O60287 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
URB1O60287 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
URB1O60287 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
URB1O60287 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.01■□□□□ 0.79
URB1O60287 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
URB1O60287 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20■□□□□ 0.79
URB1O60287 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
URB1O60287 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
URB1O60287 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
URB1O60287 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20■□□□□ 0.79
URB1O60287 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20■□□□□ 0.79
URB1O60287 SNORA78-201ENST00000459373 127 ntBASIC20■□□□□ 0.79
URB1O60287 KRT18P21-201ENST00000515767 1272 ntBASIC20■□□□□ 0.79
URB1O60287 RPPH1-201ENST00000516869 333 ntBASIC20■□□□□ 0.79
URB1O60287 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20■□□□□ 0.79
URB1O60287 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20■□□□□ 0.79
URB1O60287 FAM197Y4-202ENST00000622692 608 ntBASIC20■□□□□ 0.79
URB1O60287 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20■□□□□ 0.79
URB1O60287 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
URB1O60287 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20■□□□□ 0.79
URB1O60287 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
URB1O60287 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20■□□□□ 0.79
URB1O60287 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20■□□□□ 0.79
URB1O60287 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20■□□□□ 0.79
URB1O60287 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20■□□□□ 0.79
URB1O60287 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms