Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH7O60245 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDH7O60245 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH7O60245 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PCDH7O60245 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDH7O60245 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH7O60245 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDH7O60245 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
PCDH7O60245 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDH7O60245 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDH7O60245 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDH7O60245 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH7O60245 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH7O60245 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH7O60245 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH7O60245 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH7O60245 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH7O60245 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH7O60245 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDH7O60245 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.24■□□□□ 0.83
PCDH7O60245 AL139246.5-201ENST00000606645 996 ntBASIC20.24■□□□□ 0.83
PCDH7O60245 AL136967.2-201ENST00000623968 743 ntBASIC20.24■□□□□ 0.83
PCDH7O60245 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH7O60245 FEM1AP4-201ENST00000443167 1987 ntBASIC20.24■□□□□ 0.83
PCDH7O60245 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH7O60245 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.24■□□□□ 0.83
PCDH7O60245 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDH7O60245 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDH7O60245 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH7O60245 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH7O60245 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH7O60245 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH7O60245 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH7O60245 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH7O60245 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCDH7O60245 AC009237.3-201ENST00000393279 1427 ntBASIC20.23■□□□□ 0.83
PCDH7O60245 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDH7O60245 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PCDH7O60245 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH7O60245 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDH7O60245 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH7O60245 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH7O60245 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH7O60245 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH7O60245 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDH7O60245 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDH7O60245 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH7O60245 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDH7O60245 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH7O60245 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH7O60245 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH7O60245 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDH7O60245 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH7O60245 MIR572-201ENST00000384983 95 ntBASIC20.22■□□□□ 0.83
PCDH7O60245 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH7O60245 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDH7O60245 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDH7O60245 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PCDH7O60245 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH7O60245 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDH7O60245 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH7O60245 AF106564.1-201ENST00000607058 2553 ntBASIC20.22■□□□□ 0.83
PCDH7O60245 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH7O60245 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH7O60245 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH7O60245 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDH7O60245 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH7O60245 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH7O60245 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDH7O60245 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDH7O60245 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.21■□□□□ 0.83
PCDH7O60245 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDH7O60245 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PCDH7O60245 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDH7O60245 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH7O60245 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH7O60245 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
PCDH7O60245 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH7O60245 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
PCDH7O60245 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PCDH7O60245 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH7O60245 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH7O60245 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH7O60245 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH7O60245 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH7O60245 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH7O60245 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDH7O60245 SUDS3P1-201ENST00000505831 966 ntBASIC20.2■□□□□ 0.82
PCDH7O60245 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PCDH7O60245 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDH7O60245 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PCDH7O60245 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
PCDH7O60245 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH7O60245 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH7O60245 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH7O60245 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PCDH7O60245 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
PCDH7O60245 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDH7O60245 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDH7O60245 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms