Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRICKLE3O43900 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRICKLE3O43900 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRICKLE3O43900 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PRICKLE3O43900 AC079834.2-201ENST00000609776 1949 ntBASIC20.43■□□□□ 0.86
PRICKLE3O43900 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRICKLE3O43900 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRICKLE3O43900 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRICKLE3O43900 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRICKLE3O43900 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRICKLE3O43900 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.42■□□□□ 0.86
PRICKLE3O43900 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.42■□□□□ 0.86
PRICKLE3O43900 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.42■□□□□ 0.86
PRICKLE3O43900 AC022517.1-201ENST00000592429 346 ntBASIC20.42■□□□□ 0.86
PRICKLE3O43900 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRICKLE3O43900 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRICKLE3O43900 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRICKLE3O43900 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRICKLE3O43900 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRICKLE3O43900 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRICKLE3O43900 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRICKLE3O43900 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.41■□□□□ 0.86
PRICKLE3O43900 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.41■□□□□ 0.86
PRICKLE3O43900 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.41■□□□□ 0.86
PRICKLE3O43900 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.41■□□□□ 0.86
PRICKLE3O43900 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRICKLE3O43900 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.4■□□□□ 0.86
PRICKLE3O43900 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRICKLE3O43900 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRICKLE3O43900 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRICKLE3O43900 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRICKLE3O43900 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRICKLE3O43900 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.4■□□□□ 0.86
PRICKLE3O43900 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.4■□□□□ 0.86
PRICKLE3O43900 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
PRICKLE3O43900 AP001160.3-201ENST00000601484 763 ntBASIC20.4■□□□□ 0.86
PRICKLE3O43900 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.4■□□□□ 0.86
PRICKLE3O43900 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRICKLE3O43900 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
PRICKLE3O43900 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PRICKLE3O43900 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
PRICKLE3O43900 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRICKLE3O43900 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
PRICKLE3O43900 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRICKLE3O43900 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRICKLE3O43900 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRICKLE3O43900 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.39■□□□□ 0.85
PRICKLE3O43900 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PRICKLE3O43900 AC010141.2-201ENST00000452426 721 ntBASIC20.39■□□□□ 0.85
PRICKLE3O43900 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.39■□□□□ 0.85
PRICKLE3O43900 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRICKLE3O43900 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRICKLE3O43900 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRICKLE3O43900 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.39■□□□□ 0.85
PRICKLE3O43900 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PRICKLE3O43900 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PRICKLE3O43900 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PRICKLE3O43900 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.38■□□□□ 0.85
PRICKLE3O43900 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.38■□□□□ 0.85
PRICKLE3O43900 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.38■□□□□ 0.85
PRICKLE3O43900 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.38■□□□□ 0.85
PRICKLE3O43900 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.38■□□□□ 0.85
PRICKLE3O43900 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.38■□□□□ 0.85
PRICKLE3O43900 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRICKLE3O43900 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
PRICKLE3O43900 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRICKLE3O43900 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRICKLE3O43900 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRICKLE3O43900 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.37■□□□□ 0.85
PRICKLE3O43900 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms