Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.39■□□□□ 0.85
SLC28A2O43868 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC28A2O43868 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SLC28A2O43868 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC28A2O43868 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC28A2O43868 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC28A2O43868 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC28A2O43868 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC28A2O43868 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC28A2O43868 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC28A2O43868 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC28A2O43868 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC28A2O43868 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC28A2O43868 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC28A2O43868 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC28A2O43868 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC28A2O43868 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC28A2O43868 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC28A2O43868 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC28A2O43868 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC28A2O43868 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC28A2O43868 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC28A2O43868 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC28A2O43868 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.37■□□□□ 0.85
SLC28A2O43868 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC28A2O43868 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC28A2O43868 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC28A2O43868 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC28A2O43868 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC28A2O43868 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC28A2O43868 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC28A2O43868 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC28A2O43868 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC28A2O43868 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC28A2O43868 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC28A2O43868 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC28A2O43868 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC28A2O43868 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC28A2O43868 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC28A2O43868 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC28A2O43868 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC28A2O43868 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLC28A2O43868 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC28A2O43868 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC28A2O43868 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SLC28A2O43868 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC28A2O43868 AC142086.2-201ENST00000569753 217 ntBASIC20.36■□□□□ 0.85
SLC28A2O43868 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SLC28A2O43868 MIR4651-201ENST00000582622 73 ntBASIC20.36■□□□□ 0.85
SLC28A2O43868 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC28A2O43868 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC28A2O43868 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC28A2O43868 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLC28A2O43868 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC28A2O43868 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SLC28A2O43868 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC28A2O43868 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC28A2O43868 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
SLC28A2O43868 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC28A2O43868 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC28A2O43868 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SLC28A2O43868 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC28A2O43868 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC28A2O43868 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC28A2O43868 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC28A2O43868 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC28A2O43868 AC105233.4-201ENST00000642045 216 ntBASIC20.35■□□□□ 0.85
SLC28A2O43868 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SLC28A2O43868 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC28A2O43868 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC28A2O43868 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
SLC28A2O43868 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.35■□□□□ 0.85
SLC28A2O43868 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC28A2O43868 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC28A2O43868 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC28A2O43868 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC28A2O43868 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SLC28A2O43868 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC28A2O43868 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC28A2O43868 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SLC28A2O43868 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC28A2O43868 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC28A2O43868 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC28A2O43868 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.34■□□□□ 0.85
SLC28A2O43868 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC28A2O43868 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SLC28A2O43868 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC28A2O43868 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC28A2O43868 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC28A2O43868 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC28A2O43868 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC28A2O43868 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SLC28A2O43868 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC28A2O43868 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SLC28A2O43868 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.33■□□□□ 0.85
SLC28A2O43868 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC28A2O43868 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.33■□□□□ 0.85
SLC28A2O43868 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC28A2O43868 AC011767.1-201ENST00000617410 1153 ntBASIC20.33■□□□□ 0.85
SLC28A2O43868 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms