Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.23■□□□□ 0.99
TSPAN6O43657 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.23■□□□□ 0.99
TSPAN6O43657 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN6O43657 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN6O43657 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN6O43657 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN6O43657 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN6O43657 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN6O43657 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.22■□□□□ 0.99
TSPAN6O43657 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN6O43657 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.22■□□□□ 0.99
TSPAN6O43657 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.22■□□□□ 0.99
TSPAN6O43657 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN6O43657 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TSPAN6O43657 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN6O43657 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN6O43657 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN6O43657 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN6O43657 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN6O43657 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN6O43657 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.21■□□□□ 0.99
TSPAN6O43657 ID1-201ENST00000376105 1233 ntBASIC21.21■□□□□ 0.99
TSPAN6O43657 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.21■□□□□ 0.99
TSPAN6O43657 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.21■□□□□ 0.99
TSPAN6O43657 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.21■□□□□ 0.99
TSPAN6O43657 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.21■□□□□ 0.99
TSPAN6O43657 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.21■□□□□ 0.99
TSPAN6O43657 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
TSPAN6O43657 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN6O43657 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TSPAN6O43657 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN6O43657 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
TSPAN6O43657 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN6O43657 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.2■□□□□ 0.98
TSPAN6O43657 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN6O43657 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN6O43657 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN6O43657 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN6O43657 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN6O43657 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.2■□□□□ 0.98
TSPAN6O43657 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.2■□□□□ 0.98
TSPAN6O43657 SLC7A5P1-201ENST00000568957 537 ntBASIC21.2■□□□□ 0.98
TSPAN6O43657 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.2■□□□□ 0.98
TSPAN6O43657 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TSPAN6O43657 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN6O43657 ECEL1P1-201ENST00000373592 1742 ntBASIC21.2■□□□□ 0.98
TSPAN6O43657 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN6O43657 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN6O43657 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN6O43657 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN6O43657 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN6O43657 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN6O43657 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN6O43657 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.19■□□□□ 0.98
TSPAN6O43657 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TSPAN6O43657 AC008175.2-201ENST00000612840 297 ntBASIC21.19■□□□□ 0.98
TSPAN6O43657 AC231657.2-201ENST00000624556 255 ntBASIC21.19■□□□□ 0.98
TSPAN6O43657 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN6O43657 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN6O43657 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.19■□□□□ 0.98
TSPAN6O43657 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TSPAN6O43657 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN6O43657 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.18■□□□□ 0.98
TSPAN6O43657 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN6O43657 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN6O43657 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.18■□□□□ 0.98
TSPAN6O43657 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.18■□□□□ 0.98
TSPAN6O43657 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.18■□□□□ 0.98
TSPAN6O43657 DUX4L16-201ENST00000555130 1264 ntBASIC21.18■□□□□ 0.98
TSPAN6O43657 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TSPAN6O43657 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN6O43657 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN6O43657 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN6O43657 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN6O43657 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN6O43657 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN6O43657 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.17■□□□□ 0.98
TSPAN6O43657 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN6O43657 POU5F1P4-201ENST00000413175 1085 ntBASIC21.17■□□□□ 0.98
TSPAN6O43657 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.17■□□□□ 0.98
TSPAN6O43657 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.17■□□□□ 0.98
TSPAN6O43657 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TSPAN6O43657 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
TSPAN6O43657 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.17■□□□□ 0.98
TSPAN6O43657 AC120498.10-201ENST00000621827 505 ntBASIC21.17■□□□□ 0.98
TSPAN6O43657 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN6O43657 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN6O43657 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.17■□□□□ 0.98
TSPAN6O43657 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN6O43657 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TSPAN6O43657 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.17■□□□□ 0.98
TSPAN6O43657 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN6O43657 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN6O43657 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN6O43657 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN6O43657 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TSPAN6O43657 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN6O43657 AC003102.1-202ENST00000563394 1796 ntBASIC21.16■□□□□ 0.98
TSPAN6O43657 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.16■□□□□ 0.98
TSPAN6O43657 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms