Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.42■■□□□ 1.82
SRGAP3O43295 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
SRGAP3O43295 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SRGAP3O43295 KRT19P1-201ENST00000405746 1186 ntBASIC26.42■■□□□ 1.82
SRGAP3O43295 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC26.42■■□□□ 1.82
SRGAP3O43295 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.42■■□□□ 1.82
SRGAP3O43295 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.42■■□□□ 1.82
SRGAP3O43295 AC053503.5-201ENST00000601508 636 ntBASIC26.42■■□□□ 1.82
SRGAP3O43295 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SRGAP3O43295 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SRGAP3O43295 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SRGAP3O43295 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SRGAP3O43295 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SRGAP3O43295 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SRGAP3O43295 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
SRGAP3O43295 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SRGAP3O43295 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SRGAP3O43295 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
SRGAP3O43295 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26.41■■□□□ 1.82
SRGAP3O43295 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.41■■□□□ 1.82
SRGAP3O43295 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.41■■□□□ 1.82
SRGAP3O43295 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SRGAP3O43295 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC26.41■■□□□ 1.82
SRGAP3O43295 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SRGAP3O43295 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.41■■□□□ 1.82
SRGAP3O43295 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.41■■□□□ 1.82
SRGAP3O43295 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.41■■□□□ 1.82
SRGAP3O43295 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
SRGAP3O43295 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC26.41■■□□□ 1.82
SRGAP3O43295 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SRGAP3O43295 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
SRGAP3O43295 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SRGAP3O43295 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.4■■□□□ 1.82
SRGAP3O43295 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SRGAP3O43295 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.4■■□□□ 1.82
SRGAP3O43295 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SRGAP3O43295 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SRGAP3O43295 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SRGAP3O43295 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
SRGAP3O43295 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SRGAP3O43295 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.82
SRGAP3O43295 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SRGAP3O43295 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
SRGAP3O43295 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SRGAP3O43295 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.39■■□□□ 1.82
SRGAP3O43295 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.39■■□□□ 1.81
SRGAP3O43295 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SRGAP3O43295 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SRGAP3O43295 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.38■■□□□ 1.81
SRGAP3O43295 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.38■■□□□ 1.81
SRGAP3O43295 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.38■■□□□ 1.81
SRGAP3O43295 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SRGAP3O43295 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SRGAP3O43295 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SRGAP3O43295 FBXW4P1-201ENST00000426721 2239 ntBASIC26.38■■□□□ 1.81
SRGAP3O43295 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.38■■□□□ 1.81
SRGAP3O43295 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SRGAP3O43295 AC079834.2-201ENST00000609776 1949 ntBASIC26.37■■□□□ 1.81
SRGAP3O43295 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SRGAP3O43295 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SRGAP3O43295 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SRGAP3O43295 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SRGAP3O43295 AC138907.5-202ENST00000569484 235 ntBASIC26.37■■□□□ 1.81
SRGAP3O43295 IKBKGP1-201ENST00000612193 1073 ntBASIC26.37■■□□□ 1.81
SRGAP3O43295 AC092666.2-201ENST00000613287 246 ntBASIC26.37■■□□□ 1.81
SRGAP3O43295 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SRGAP3O43295 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SRGAP3O43295 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.37■■□□□ 1.81
SRGAP3O43295 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SRGAP3O43295 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.37■■□□□ 1.81
SRGAP3O43295 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SRGAP3O43295 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SRGAP3O43295 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SRGAP3O43295 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SRGAP3O43295 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC26.36■■□□□ 1.81
SRGAP3O43295 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
SRGAP3O43295 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SRGAP3O43295 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SRGAP3O43295 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SRGAP3O43295 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.36■■□□□ 1.81
SRGAP3O43295 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.36■■□□□ 1.81
SRGAP3O43295 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.36■■□□□ 1.81
SRGAP3O43295 AP001160.3-201ENST00000601484 763 ntBASIC26.36■■□□□ 1.81
SRGAP3O43295 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.35■■□□□ 1.81
SRGAP3O43295 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.35■■□□□ 1.81
SRGAP3O43295 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.35■■□□□ 1.81
SRGAP3O43295 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.35■■□□□ 1.81
SRGAP3O43295 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.35■■□□□ 1.81
SRGAP3O43295 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SRGAP3O43295 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.35■■□□□ 1.81
SRGAP3O43295 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SRGAP3O43295 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
SRGAP3O43295 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SRGAP3O43295 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SRGAP3O43295 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SRGAP3O43295 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.34■■□□□ 1.81
SRGAP3O43295 AC010141.2-201ENST00000452426 721 ntBASIC26.34■■□□□ 1.81
SRGAP3O43295 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
SRGAP3O43295 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.34■■□□□ 1.81
SRGAP3O43295 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms