Protein–RNA interactions for Protein: O15232

MATN3, Matrilin-3, humanhuman

Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3O15232 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MATN3O15232 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.62■■□□□ 1.05
MATN3O15232 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.62■■□□□ 1.05
MATN3O15232 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.62■■□□□ 1.05
MATN3O15232 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MATN3O15232 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
MATN3O15232 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
MATN3O15232 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.61■■□□□ 1.05
MATN3O15232 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MATN3O15232 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MATN3O15232 Z98882.1-201ENST00000622160 2253 ntBASIC21.61■■□□□ 1.05
MATN3O15232 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MATN3O15232 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.61■■□□□ 1.05
MATN3O15232 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MATN3O15232 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MATN3O15232 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.61■■□□□ 1.05
MATN3O15232 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
MATN3O15232 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.61■■□□□ 1.05
MATN3O15232 TERF1P2-201ENST00000583350 1212 ntBASIC21.61■■□□□ 1.05
MATN3O15232 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MATN3O15232 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 AC019069.1-201ENST00000610008 1333 ntBASIC21.6■■□□□ 1.05
MATN3O15232 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.6■■□□□ 1.05
MATN3O15232 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 AC079140.4-201ENST00000507448 529 ntBASIC21.6■■□□□ 1.05
MATN3O15232 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MATN3O15232 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.6■■□□□ 1.05
MATN3O15232 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
MATN3O15232 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MATN3O15232 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.59■■□□□ 1.05
MATN3O15232 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MATN3O15232 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MATN3O15232 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
MATN3O15232 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MATN3O15232 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
MATN3O15232 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MATN3O15232 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.59■■□□□ 1.05
MATN3O15232 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.59■■□□□ 1.05
MATN3O15232 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.59■■□□□ 1.05
MATN3O15232 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MATN3O15232 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MATN3O15232 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MATN3O15232 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MATN3O15232 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MATN3O15232 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MATN3O15232 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MATN3O15232 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MATN3O15232 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MATN3O15232 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MATN3O15232 EEF1DP3-203ENST00000566025 782 ntBASIC21.58■■□□□ 1.05
MATN3O15232 CCDC92B-201ENST00000575506 885 ntBASIC21.58■■□□□ 1.05
MATN3O15232 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.58■■□□□ 1.05
MATN3O15232 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
MATN3O15232 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
MATN3O15232 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.58■■□□□ 1.04
MATN3O15232 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.58■■□□□ 1.04
MATN3O15232 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.58■■□□□ 1.04
MATN3O15232 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
MATN3O15232 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
MATN3O15232 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 AC026310.3-201ENST00000625186 2373 ntBASIC21.57■■□□□ 1.04
MATN3O15232 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.57■■□□□ 1.04
MATN3O15232 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.57■■□□□ 1.04
MATN3O15232 AC053503.5-201ENST00000601508 636 ntBASIC21.57■■□□□ 1.04
MATN3O15232 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
MATN3O15232 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MATN3O15232 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MATN3O15232 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.56■■□□□ 1.04
MATN3O15232 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.56■■□□□ 1.04
MATN3O15232 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
MATN3O15232 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.56■■□□□ 1.04
MATN3O15232 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MATN3O15232 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms