Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PFDN6O15212 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PFDN6O15212 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PFDN6O15212 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PFDN6O15212 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PFDN6O15212 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.21■□□□□ 0.99
PFDN6O15212 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PFDN6O15212 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN6O15212 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN6O15212 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.2■□□□□ 0.98
PFDN6O15212 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN6O15212 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.2■□□□□ 0.98
PFDN6O15212 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN6O15212 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.2■□□□□ 0.98
PFDN6O15212 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PFDN6O15212 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PFDN6O15212 AL031432.3-201ENST00000607698 485 ntBASIC21.2■□□□□ 0.98
PFDN6O15212 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.2■□□□□ 0.98
PFDN6O15212 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PFDN6O15212 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.2■□□□□ 0.98
PFDN6O15212 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.2■□□□□ 0.98
PFDN6O15212 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN6O15212 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.2■□□□□ 0.98
PFDN6O15212 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PFDN6O15212 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PFDN6O15212 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PFDN6O15212 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.19■□□□□ 0.98
PFDN6O15212 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PFDN6O15212 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.19■□□□□ 0.98
PFDN6O15212 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.19■□□□□ 0.98
PFDN6O15212 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PFDN6O15212 SUDS3P1-201ENST00000505831 966 ntBASIC21.19■□□□□ 0.98
PFDN6O15212 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.19■□□□□ 0.98
PFDN6O15212 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PFDN6O15212 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.19■□□□□ 0.98
PFDN6O15212 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.18■□□□□ 0.98
PFDN6O15212 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PFDN6O15212 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PFDN6O15212 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PFDN6O15212 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.18■□□□□ 0.98
PFDN6O15212 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PFDN6O15212 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.18■□□□□ 0.98
PFDN6O15212 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PFDN6O15212 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PFDN6O15212 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PFDN6O15212 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.17■□□□□ 0.98
PFDN6O15212 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PFDN6O15212 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PFDN6O15212 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PFDN6O15212 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PFDN6O15212 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.17■□□□□ 0.98
PFDN6O15212 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.17■□□□□ 0.98
PFDN6O15212 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.17■□□□□ 0.98
PFDN6O15212 BX005040.4-201ENST00000637145 1518 ntBASIC21.17■□□□□ 0.98
PFDN6O15212 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.17■□□□□ 0.98
PFDN6O15212 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PFDN6O15212 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PFDN6O15212 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PFDN6O15212 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.17■□□□□ 0.98
PFDN6O15212 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.17■□□□□ 0.98
PFDN6O15212 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PFDN6O15212 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.16■□□□□ 0.98
PFDN6O15212 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PFDN6O15212 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PFDN6O15212 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PFDN6O15212 AC026471.6-201ENST00000622954 1905 ntBASIC21.16■□□□□ 0.98
PFDN6O15212 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PFDN6O15212 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.16■□□□□ 0.98
PFDN6O15212 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.16■□□□□ 0.98
PFDN6O15212 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.16■□□□□ 0.98
PFDN6O15212 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PFDN6O15212 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.16■□□□□ 0.98
PFDN6O15212 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.16■□□□□ 0.98
PFDN6O15212 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.16■□□□□ 0.98
PFDN6O15212 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.16■□□□□ 0.98
PFDN6O15212 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.16■□□□□ 0.98
PFDN6O15212 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PFDN6O15212 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
PFDN6O15212 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PFDN6O15212 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN6O15212 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN6O15212 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.15■□□□□ 0.98
PFDN6O15212 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.15■□□□□ 0.98
PFDN6O15212 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN6O15212 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN6O15212 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN6O15212 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PFDN6O15212 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.15■□□□□ 0.98
PFDN6O15212 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
PFDN6O15212 AL354811.1-201ENST00000610286 706 ntBASIC21.15■□□□□ 0.98
PFDN6O15212 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PFDN6O15212 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN6O15212 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN6O15212 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN6O15212 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PFDN6O15212 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.15■□□□□ 0.98
PFDN6O15212 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PFDN6O15212 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PFDN6O15212 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PFDN6O15212 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms