Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NTN3O00634 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.27■□□□□ 0.84
NTN3O00634 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NTN3O00634 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NTN3O00634 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NTN3O00634 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NTN3O00634 AC083880.1-201ENST00000608266 535 ntBASIC20.27■□□□□ 0.84
NTN3O00634 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NTN3O00634 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NTN3O00634 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NTN3O00634 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.26■□□□□ 0.83
NTN3O00634 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NTN3O00634 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.26■□□□□ 0.83
NTN3O00634 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.26■□□□□ 0.83
NTN3O00634 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NTN3O00634 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NTN3O00634 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.26■□□□□ 0.83
NTN3O00634 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NTN3O00634 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.26■□□□□ 0.83
NTN3O00634 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.26■□□□□ 0.83
NTN3O00634 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.26■□□□□ 0.83
NTN3O00634 RARRES2P4-201ENST00000514074 484 ntBASIC20.26■□□□□ 0.83
NTN3O00634 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NTN3O00634 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NTN3O00634 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NTN3O00634 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NTN3O00634 AC010980.2-201ENST00000587099 1412 ntBASIC20.26■□□□□ 0.83
NTN3O00634 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NTN3O00634 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NTN3O00634 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NTN3O00634 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.25■□□□□ 0.83
NTN3O00634 AC097658.1-201ENST00000475555 843 ntBASIC20.25■□□□□ 0.83
NTN3O00634 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.25■□□□□ 0.83
NTN3O00634 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.25■□□□□ 0.83
NTN3O00634 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NTN3O00634 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NTN3O00634 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NTN3O00634 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NTN3O00634 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.25■□□□□ 0.83
NTN3O00634 AC061975.6-201ENST00000579045 1553 ntBASIC20.25■□□□□ 0.83
NTN3O00634 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NTN3O00634 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NTN3O00634 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NTN3O00634 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NTN3O00634 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NTN3O00634 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NTN3O00634 KRT18P29-201ENST00000397031 1267 ntBASIC20.24■□□□□ 0.83
NTN3O00634 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.24■□□□□ 0.83
NTN3O00634 AC091874.3-201ENST00000512672 1195 ntBASIC20.24■□□□□ 0.83
NTN3O00634 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
NTN3O00634 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
NTN3O00634 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.24■□□□□ 0.83
NTN3O00634 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.24■□□□□ 0.83
NTN3O00634 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NTN3O00634 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NTN3O00634 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NTN3O00634 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NTN3O00634 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NTN3O00634 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.23■□□□□ 0.83
NTN3O00634 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.23■□□□□ 0.83
NTN3O00634 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.23■□□□□ 0.83
NTN3O00634 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NTN3O00634 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NTN3O00634 PRORSD1P-201ENST00000295112 541 ntBASIC20.23■□□□□ 0.83
NTN3O00634 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NTN3O00634 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.23■□□□□ 0.83
NTN3O00634 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.23■□□□□ 0.83
NTN3O00634 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.23■□□□□ 0.83
NTN3O00634 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.23■□□□□ 0.83
NTN3O00634 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.23■□□□□ 0.83
NTN3O00634 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.23■□□□□ 0.83
NTN3O00634 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.23■□□□□ 0.83
NTN3O00634 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NTN3O00634 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NTN3O00634 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NTN3O00634 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NTN3O00634 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NTN3O00634 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.22■□□□□ 0.83
NTN3O00634 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.22■□□□□ 0.83
NTN3O00634 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NTN3O00634 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NTN3O00634 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NTN3O00634 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.22■□□□□ 0.83
NTN3O00634 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NTN3O00634 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
NTN3O00634 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.22■□□□□ 0.83
NTN3O00634 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NTN3O00634 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NTN3O00634 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NTN3O00634 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NTN3O00634 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NTN3O00634 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NTN3O00634 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.22■□□□□ 0.83
NTN3O00634 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NTN3O00634 AC003102.1-202ENST00000563394 1796 ntBASIC20.21■□□□□ 0.83
NTN3O00634 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.21■□□□□ 0.83
NTN3O00634 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NTN3O00634 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NTN3O00634 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NTN3O00634 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms