Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.11■□□□□ 0.81
PDLIM1O00151 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.11■□□□□ 0.81
PDLIM1O00151 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.11■□□□□ 0.81
PDLIM1O00151 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.11■□□□□ 0.81
PDLIM1O00151 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDLIM1O00151 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.1■□□□□ 0.81
PDLIM1O00151 CA15P2-201ENST00000611168 834 ntBASIC20.1■□□□□ 0.81
PDLIM1O00151 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PDLIM1O00151 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDLIM1O00151 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.09■□□□□ 0.81
PDLIM1O00151 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PDLIM1O00151 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
PDLIM1O00151 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.09■□□□□ 0.81
PDLIM1O00151 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.09■□□□□ 0.81
PDLIM1O00151 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM1O00151 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.09■□□□□ 0.81
PDLIM1O00151 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.09■□□□□ 0.81
PDLIM1O00151 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.09■□□□□ 0.81
PDLIM1O00151 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM1O00151 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.09■□□□□ 0.81
PDLIM1O00151 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM1O00151 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
PDLIM1O00151 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM1O00151 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM1O00151 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDLIM1O00151 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PDLIM1O00151 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM1O00151 AC005703.6-201ENST00000623265 1329 ntBASIC20.08■□□□□ 0.81
PDLIM1O00151 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM1O00151 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDLIM1O00151 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.08■□□□□ 0.81
PDLIM1O00151 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.08■□□□□ 0.81
PDLIM1O00151 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PDLIM1O00151 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PDLIM1O00151 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
PDLIM1O00151 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.08■□□□□ 0.8
PDLIM1O00151 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDLIM1O00151 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.07■□□□□ 0.8
PDLIM1O00151 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.07■□□□□ 0.8
PDLIM1O00151 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.07■□□□□ 0.8
PDLIM1O00151 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
PDLIM1O00151 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 FP325331.1-202ENST00000623531 1380 ntBASIC20.07■□□□□ 0.8
PDLIM1O00151 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.07■□□□□ 0.8
PDLIM1O00151 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDLIM1O00151 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PDLIM1O00151 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM1O00151 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM1O00151 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM1O00151 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.06■□□□□ 0.8
PDLIM1O00151 AL356740.2-201ENST00000601559 647 ntBASIC20.06■□□□□ 0.8
PDLIM1O00151 AC009086.3-201ENST00000623486 1008 ntBASIC20.06■□□□□ 0.8
PDLIM1O00151 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM1O00151 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM1O00151 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.06■□□□□ 0.8
PDLIM1O00151 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM1O00151 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM1O00151 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM1O00151 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.06■□□□□ 0.8
PDLIM1O00151 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM1O00151 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms