Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM4A7MD48 AL355001.2-201ENST00000620617 1191 ntBASIC17.08■□□□□ 0.32
SRRM4A7MD48 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM4A7MD48 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM4A7MD48 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM4A7MD48 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM4A7MD48 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM4A7MD48 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM4A7MD48 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM4A7MD48 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM4A7MD48 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM4A7MD48 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM4A7MD48 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.07■□□□□ 0.32
SRRM4A7MD48 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.07■□□□□ 0.32
SRRM4A7MD48 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM4A7MD48 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.07■□□□□ 0.32
SRRM4A7MD48 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.07■□□□□ 0.32
SRRM4A7MD48 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM4A7MD48 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM4A7MD48 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM4A7MD48 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
SRRM4A7MD48 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SRRM4A7MD48 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.06■□□□□ 0.32
SRRM4A7MD48 MIR939-201ENST00000401314 82 ntBASIC17.06■□□□□ 0.32
SRRM4A7MD48 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.06■□□□□ 0.32
SRRM4A7MD48 AF213884.3-201ENST00000563833 479 ntBASIC17.06■□□□□ 0.32
SRRM4A7MD48 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
SRRM4A7MD48 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.06■□□□□ 0.32
SRRM4A7MD48 AL136967.2-201ENST00000623968 743 ntBASIC17.06■□□□□ 0.32
SRRM4A7MD48 AC105233.4-201ENST00000642045 216 ntBASIC17.06■□□□□ 0.32
SRRM4A7MD48 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.06■□□□□ 0.32
SRRM4A7MD48 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.06■□□□□ 0.32
SRRM4A7MD48 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.06■□□□□ 0.32
SRRM4A7MD48 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
SRRM4A7MD48 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM4A7MD48 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM4A7MD48 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.05■□□□□ 0.32
SRRM4A7MD48 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SRRM4A7MD48 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM4A7MD48 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.05■□□□□ 0.32
SRRM4A7MD48 RASA4CP-201ENST00000424092 1398 ntBASIC17.05■□□□□ 0.32
SRRM4A7MD48 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM4A7MD48 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SRRM4A7MD48 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.05■□□□□ 0.32
SRRM4A7MD48 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
SRRM4A7MD48 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM4A7MD48 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.05■□□□□ 0.32
SRRM4A7MD48 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.05■□□□□ 0.32
SRRM4A7MD48 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SRRM4A7MD48 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SRRM4A7MD48 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.05■□□□□ 0.32
SRRM4A7MD48 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM4A7MD48 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM4A7MD48 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.04■□□□□ 0.32
SRRM4A7MD48 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SRRM4A7MD48 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SRRM4A7MD48 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRRM4A7MD48 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRRM4A7MD48 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRRM4A7MD48 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SRRM4A7MD48 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRRM4A7MD48 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.04■□□□□ 0.32
SRRM4A7MD48 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRRM4A7MD48 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRRM4A7MD48 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRRM4A7MD48 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRRM4A7MD48 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRRM4A7MD48 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRRM4A7MD48 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRRM4A7MD48 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRRM4A7MD48 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.04■□□□□ 0.32
SRRM4A7MD48 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRRM4A7MD48 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
SRRM4A7MD48 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
SRRM4A7MD48 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SRRM4A7MD48 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SRRM4A7MD48 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SRRM4A7MD48 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.03■□□□□ 0.32
SRRM4A7MD48 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SRRM4A7MD48 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SRRM4A7MD48 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
SRRM4A7MD48 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.03■□□□□ 0.32
SRRM4A7MD48 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.03■□□□□ 0.32
SRRM4A7MD48 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms