Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM49BA6NDI0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.4■■□□□ 1.34
TRIM49BA6NDI0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
TRIM49BA6NDI0 AC027682.1-201ENST00000562846 899 ntBASIC23.4■■□□□ 1.34
TRIM49BA6NDI0 AL031432.3-201ENST00000607698 485 ntBASIC23.4■■□□□ 1.34
TRIM49BA6NDI0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM49BA6NDI0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.4■■□□□ 1.34
TRIM49BA6NDI0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM49BA6NDI0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM49BA6NDI0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM49BA6NDI0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM49BA6NDI0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM49BA6NDI0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
TRIM49BA6NDI0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM49BA6NDI0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
TRIM49BA6NDI0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM49BA6NDI0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM49BA6NDI0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.39■■□□□ 1.33
TRIM49BA6NDI0 AF213884.3-201ENST00000563833 479 ntBASIC23.39■■□□□ 1.33
TRIM49BA6NDI0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.39■■□□□ 1.33
TRIM49BA6NDI0 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.39■■□□□ 1.33
TRIM49BA6NDI0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.39■■□□□ 1.33
TRIM49BA6NDI0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM49BA6NDI0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.38■■□□□ 1.33
TRIM49BA6NDI0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 EDA-201ENST00000338901 1233 ntBASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 MIR939-201ENST00000401314 82 ntBASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM49BA6NDI0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM49BA6NDI0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.36■■□□□ 1.33
TRIM49BA6NDI0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.36■■□□□ 1.33
TRIM49BA6NDI0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
TRIM49BA6NDI0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
TRIM49BA6NDI0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM49BA6NDI0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM49BA6NDI0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.36■■□□□ 1.33
TRIM49BA6NDI0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM49BA6NDI0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TRIM49BA6NDI0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.36■■□□□ 1.33
TRIM49BA6NDI0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM49BA6NDI0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM49BA6NDI0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM49BA6NDI0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM49BA6NDI0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.35■■□□□ 1.33
TRIM49BA6NDI0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
TRIM49BA6NDI0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TRIM49BA6NDI0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.35■■□□□ 1.33
TRIM49BA6NDI0 AL355001.2-201ENST00000620617 1191 ntBASIC23.35■■□□□ 1.33
TRIM49BA6NDI0 AC105233.4-201ENST00000642045 216 ntBASIC23.35■■□□□ 1.33
TRIM49BA6NDI0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM49BA6NDI0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.35■■□□□ 1.33
TRIM49BA6NDI0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM49BA6NDI0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.34■■□□□ 1.33
TRIM49BA6NDI0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM49BA6NDI0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM49BA6NDI0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
TRIM49BA6NDI0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM49BA6NDI0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.34■■□□□ 1.33
TRIM49BA6NDI0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.34■■□□□ 1.33
TRIM49BA6NDI0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.34■■□□□ 1.33
TRIM49BA6NDI0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.34■■□□□ 1.33
TRIM49BA6NDI0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.34■■□□□ 1.33
TRIM49BA6NDI0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM49BA6NDI0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM49BA6NDI0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms