Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
SSC5DA1L4H1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SSC5DA1L4H1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SSC5DA1L4H1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SSC5DA1L4H1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC25.03■■□□□ 1.6
SSC5DA1L4H1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SSC5DA1L4H1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC25.03■■□□□ 1.6
SSC5DA1L4H1 AC142381.4-202ENST00000563973 229 ntBASIC25.03■■□□□ 1.6
SSC5DA1L4H1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC25.03■■□□□ 1.6
SSC5DA1L4H1 AC008175.2-201ENST00000612840 297 ntBASIC25.03■■□□□ 1.6
SSC5DA1L4H1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SSC5DA1L4H1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SSC5DA1L4H1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
SSC5DA1L4H1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SSC5DA1L4H1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.02■■□□□ 1.6
SSC5DA1L4H1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC25.02■■□□□ 1.6
SSC5DA1L4H1 AC026366.1-201ENST00000488803 879 ntBASIC25.02■■□□□ 1.6
SSC5DA1L4H1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC25.02■■□□□ 1.6
SSC5DA1L4H1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
SSC5DA1L4H1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.02■■□□□ 1.6
SSC5DA1L4H1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SSC5DA1L4H1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SSC5DA1L4H1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC25.02■■□□□ 1.6
SSC5DA1L4H1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
SSC5DA1L4H1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SSC5DA1L4H1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 AC243732.1-201ENST00000612648 864 ntBASIC25.01■■□□□ 1.59
SSC5DA1L4H1 AC073648.6-201ENST00000641589 218 ntBASIC25.01■■□□□ 1.59
SSC5DA1L4H1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 POU5F1P4-201ENST00000413175 1085 ntBASIC25.01■■□□□ 1.59
SSC5DA1L4H1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 AP003097.1-201ENST00000530657 1135 ntBASIC25.01■■□□□ 1.59
SSC5DA1L4H1 AC120498.10-201ENST00000621827 505 ntBASIC25.01■■□□□ 1.59
SSC5DA1L4H1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 AP006294.2-201ENST00000641667 209 ntBASIC25.01■■□□□ 1.59
SSC5DA1L4H1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC25.01■■□□□ 1.59
SSC5DA1L4H1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25■■□□□ 1.59
SSC5DA1L4H1 AC137767.1-201ENST00000602918 1920 ntBASIC25■■□□□ 1.59
SSC5DA1L4H1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25■■□□□ 1.59
SSC5DA1L4H1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SSC5DA1L4H1 UNC93B4-201ENST00000505679 747 ntBASIC25■■□□□ 1.59
SSC5DA1L4H1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25■■□□□ 1.59
SSC5DA1L4H1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25■■□□□ 1.59
SSC5DA1L4H1 AL591742.1-201ENST00000604433 565 ntBASIC25■■□□□ 1.59
SSC5DA1L4H1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC25■■□□□ 1.59
SSC5DA1L4H1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SSC5DA1L4H1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25■■□□□ 1.59
SSC5DA1L4H1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC24.99■■□□□ 1.59
SSC5DA1L4H1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SSC5DA1L4H1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SSC5DA1L4H1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.99■■□□□ 1.59
SSC5DA1L4H1 USP36-216ENST00000589424 970 ntTSL 5 BASIC24.99■■□□□ 1.59
SSC5DA1L4H1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.99■■□□□ 1.59
SSC5DA1L4H1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SSC5DA1L4H1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
SSC5DA1L4H1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC24.98■■□□□ 1.59
SSC5DA1L4H1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.98■■□□□ 1.59
SSC5DA1L4H1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SSC5DA1L4H1 AC061975.6-201ENST00000579045 1553 ntBASIC24.98■■□□□ 1.59
SSC5DA1L4H1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SSC5DA1L4H1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.98■■□□□ 1.59
SSC5DA1L4H1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.98■■□□□ 1.59
SSC5DA1L4H1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SSC5DA1L4H1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SSC5DA1L4H1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SSC5DA1L4H1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 KRT17P1-201ENST00000399211 1546 ntBASIC24.97■■□□□ 1.59
SSC5DA1L4H1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 RPS2P4-201ENST00000476944 856 ntBASIC24.97■■□□□ 1.59
SSC5DA1L4H1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.97■■□□□ 1.59
SSC5DA1L4H1 AC008403.3-201ENST00000598924 454 ntBASIC24.97■■□□□ 1.59
SSC5DA1L4H1 AC087742.1-201ENST00000575880 1738 ntBASIC24.96■■□□□ 1.59
SSC5DA1L4H1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
SSC5DA1L4H1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms