Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC189A1A4V9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC189A1A4V9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC189A1A4V9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC189A1A4V9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 SERBP1P1-201ENST00000396021 1160 ntBASIC21.13■□□□□ 0.97
CCDC189A1A4V9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC189A1A4V9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC189A1A4V9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC189A1A4V9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC189A1A4V9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC189A1A4V9 MIR4466-201ENST00000606121 54 ntBASIC21.11■□□□□ 0.97
CCDC189A1A4V9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC189A1A4V9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC189A1A4V9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC189A1A4V9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC189A1A4V9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC189A1A4V9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 AC104564.3-201ENST00000582367 638 ntBASIC21.1■□□□□ 0.97
CCDC189A1A4V9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC189A1A4V9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC189A1A4V9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC189A1A4V9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC189A1A4V9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC189A1A4V9 PKD1P6-201ENST00000343738 4769 ntBASIC21.09■□□□□ 0.97
CCDC189A1A4V9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC189A1A4V9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC189A1A4V9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC189A1A4V9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms