Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV21A0A0B4J279 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV21A0A0B4J279 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 DUX4L19-201ENST00000557448 1267 ntBASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 AL138724.1-201ENST00000606771 1088 ntBASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 AL035685.1-201ENST00000636663 812 ntBASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAV21A0A0B4J279 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.71■□□□□ 0.1
TRAV21A0A0B4J279 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV21A0A0B4J279 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
TRAV21A0A0B4J279 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV21A0A0B4J279 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.71■□□□□ 0.1
TRAV21A0A0B4J279 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 AP004607.7-201ENST00000527152 1677 ntBASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV21A0A0B4J279 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV21A0A0B4J279 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms